| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4213 |
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| Symbol | |
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| ID | 7971296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4454349 |
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| End bp | 4455020 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644794799 |
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| Product | dinucleoside polyphosphate hydrolase |
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| Protein accession | YP_002946092 |
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| Protein GI | 239817182 |
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| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
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| COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGACC GGGACGGCTT CAGGCCCAAC GTCGGCATCA TCCTGCTCAA CCAGAGAAAC
CAGGTTTTCT GGGGCAAACG CATACGCACG CATTCCTGGC AGTTTCCGCA AGGCGGCATC
GACCGCGGCG AAAGTCCCGA ACAAGCCATG TTCCGGGAAC TGCACGAGGA AGTCGGACTC
CATCCGGAGC ACGTGCGCAT CGTGGCCCGT ACCCGTGACT GGTTGCGCTA CGAGGTGCCG
GATCGGTTCA TTCGCCGTGA CGCACGGGGC CACTACAAGG GCCAGAAGCA AATCTGGTAT
TTGCTGCAAT TGATCGGTCA CGACTGGGAT CTGAACCTGC GCGCGACCGA CCACCCCGAA
TTCGACGCCT GGCGATGGCA CGACTACTGG GTGCCGCTCG ATGTGGTCGT CGAATTCAAA
CGCGGCGTCT ACGAGATGGC ACTGACCGAG CTTGCTCGCT ACCTGCCGCG GCAGGATTTC
CGCAACCGCT TCCTGCGCAG CAACGTGCGC GCCCGGGAGT TCGAGCGCCA CATGCCAGAC
GGCGGCGCGC CCGCGGGGCT GGACCTGCCG CCCGGCGGCA GTTTCGACCC GCATCCCGAC
ATTACTTCTG CGAGCGATGA CCCTTCCCCT CCTCCCCACA ACAAAGCGCC CTTCCTTCCG
TCGCAGCGCT GA
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| Protein sequence | MLDRDGFRPN VGIILLNQRN QVFWGKRIRT HSWQFPQGGI DRGESPEQAM FRELHEEVGL
HPEHVRIVAR TRDWLRYEVP DRFIRRDARG HYKGQKQIWY LLQLIGHDWD LNLRATDHPE
FDAWRWHDYW VPLDVVVEFK RGVYEMALTE LARYLPRQDF RNRFLRSNVR AREFERHMPD
GGAPAGLDLP PGGSFDPHPD ITSASDDPSP PPHNKAPFLP SQR
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