| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4207 |
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| Symbol | |
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| ID | 7971944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4448636 |
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| End bp | 4449487 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644794793 |
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| Product | modification methylase, HemK family |
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| Protein accession | YP_002946086 |
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| Protein GI | 239817176 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2890] Methylase of polypeptide chain release factors |
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| TIGRFAM ID | [TIGR00536] HemK family putative methylases
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGCCA CGGCCACCAC GCCATCCACC GTGGCCCAGG CACTGGCTGC GGCCGTGGCG
CTGGGCATCG ACCGGCTCGA CGCGCAATTG CTGCTGCTGC ATGCGCTGGG CCGCGCGCCG
CACGACCGCG CCTGGCTGCT GGCGCACGAC ACCGACACCC TTTCCGATGC GGCCTGGTCC
GCGCTTTCGG CGCAGCTGCC GCGCCGGCTG GCGGGCGAGC CGGTGGCCTA CCTGCTCGGC
GAAAAGGAAT TCCACGGCCT CGGCCTGCAG GTGGATGCAC GGGTGCTGGT GCCGCGCCCC
GACACCGAAA CGCTGGTCGA CTGGGCCCTG CAATGCCTCG AAGGCCGCGA TGCGCCGCGC
GTGCTCGACC TGGGCACCGG CAGCGGCGCG ATCGCGCTGG CGCTGCAGCA TGCGCGCCCC
GATGCGCTGG TCGACGCGGT CGATGCCAGC GCCGACGCAC TGGCCGTTGC CGAGGCCAAT
GCGCAGCGCC TGGGCCTGCC GGTGCGCTTT CGCCAGGCCC ACTGGCTCGA CGGCGCGGCC
GGCGGCTACG CGGTCATTGC CAGCAATCCG CCCTACATCG CGGCCGGCGA CCCGCACCTG
GCGGCGCTGC AGCACGAGCC GCTGGCGGCG CTGGTGGCCG GCCCCGACGG GCTGGCCGAC
ATCCGCCAGA TCGTGCAGCA GGCCCCCGCG CACCTGGCGG ACGGCGGCTG GCTGCTGCTC
GAGCACGGCC ACGACCAGGC CGCGGCCGTG CGCCAGCTGC TCGGCGCGCG TGGCTTTGCC
GAAGTGCAAA GCCGCGACGA CCTTGCCGGC ATCCAGCGCT GTTCCGGCGG GATCTGGCGC
ACGGTGAAAT AA
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| Protein sequence | MTATATTPST VAQALAAAVA LGIDRLDAQL LLLHALGRAP HDRAWLLAHD TDTLSDAAWS
ALSAQLPRRL AGEPVAYLLG EKEFHGLGLQ VDARVLVPRP DTETLVDWAL QCLEGRDAPR
VLDLGTGSGA IALALQHARP DALVDAVDAS ADALAVAEAN AQRLGLPVRF RQAHWLDGAA
GGYAVIASNP PYIAAGDPHL AALQHEPLAA LVAGPDGLAD IRQIVQQAPA HLADGGWLLL
EHGHDQAAAV RQLLGARGFA EVQSRDDLAG IQRCSGGIWR TVK
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