| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4191 |
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| Symbol | |
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| ID | 7971928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4435886 |
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| End bp | 4436869 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644794777 |
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| Product | flagellar rod assembly protein/muramidase FlgJ |
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| Protein accession | YP_002946070 |
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| Protein GI | 239817160 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1705] Muramidase (flagellum-specific) |
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| TIGRFAM ID | [TIGR02541] flagellar rod assembly protein/muramidase FlgJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCATCA CCGAAAGCAG AAGCGGCGCG CTGGACCAGC GCCTTGCACT CGACGTGCAG
GGCGTCGATG CCTTGCGCTA CACCGTGCGC AGCTCGCCCG AAGAGGGCCT GAAGCAGGTG
TCGCGCCAGT TCGAGGCACT GTTCATGAAC ATGGTGCTCA AGAGCATGCG CGAGGCCACG
CCTTCGAGCG GGCTGCTGGA GAACCGCGAC CAGAAGATCT ACATGTCGAT GCTCGACCAG
CAGCTCGCGC AGAACCTCTC GGGGCGTGGC GTGGGCCTGG CCGAGGCCAT GCTCGCGCAG
CTCAGCCGCG CGGCACCCTC GGGCGAAACG GACGGCAGCG GCAGCGAAGG CATGCCGCTC
GCGCCCCGCG CGGGCATTCC GCTCACGCCG CAGTCGGGCA TTCCGCTCGG CTCGTCGCCA
CTGCCATCGT CATTGCCATC CGTACCGGCA AGGCCATCGG CCGCATCGGT GGACCTGGGC
ATCTACCAGC GCAACAGCGA CCGCTCGGCC GCGGGCGCCG TGGCCTCGCT GCAGGGCAAT
GTCGACAGCT TCGTGCAGCG CATGGGCGGT TCCGCGCAGG TGGCGAGCGA GGCGAGCGGC
GTGCCCGCGC CGCTGATCCT CGCGCAGGCC GCGCTCGAAT CGGGCTGGGG CAAGCGCGAG
ATCCGCGCCG ACGACGGCAC CCAGAGCTTC AACCTGTTCG GCATCAAGGC CGACCGCAGC
TGGAAGGGTC CGGTGGTGGA GACCACCACG ACCGAATACG TGGACGGCGA GCCGCAGCGC
GTGCGCGCGA AGTTCAGGGC CTATGCCTCC TACGACGAGG CCTTCACCGA CTACGCCCGG
TTCATCACGC GCAACCCGCG CTACGCCGGC GTGCTGGCCG CCGACACGCC GGCCGAGGCC
GCGCACGGCC TGCAGAAGGC CGGCTACGCC ACCGATCCGC AGTACGGGCA GAAGCTCGTT
CGCATCATGC AGAAGTTCAG CTGA
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| Protein sequence | MAITESRSGA LDQRLALDVQ GVDALRYTVR SSPEEGLKQV SRQFEALFMN MVLKSMREAT
PSSGLLENRD QKIYMSMLDQ QLAQNLSGRG VGLAEAMLAQ LSRAAPSGET DGSGSEGMPL
APRAGIPLTP QSGIPLGSSP LPSSLPSVPA RPSAASVDLG IYQRNSDRSA AGAVASLQGN
VDSFVQRMGG SAQVASEASG VPAPLILAQA ALESGWGKRE IRADDGTQSF NLFGIKADRS
WKGPVVETTT TEYVDGEPQR VRAKFRAYAS YDEAFTDYAR FITRNPRYAG VLAADTPAEA
AHGLQKAGYA TDPQYGQKLV RIMQKFS
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