Gene Vapar_4174 details

Gene Information

• Locus tag: Vapar_4174
• ID: 7971911
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012791
• Strand: +
• Start bp: 4416461
• End bp: 4416958
• Gene Length: 498 bp
• Protein Length: 165 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 644794760
• Product: flagellar basal body-associated protein FliL
• Protein accession: YP_002946053
• Protein GI: 239817143
• COG category: [N] Cell motility
• COG ID: [COG1580] Flagellar basal body-associated protein

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTACCA GTCCTCCTGT CGCACTCGCC CCCGTTCCCC CTTCCCCCGC ACGTCCATCG 
AAGCTGTGGA TCGTGCTCCT GATCGTCGCG CTGGTTGGCG CGCTGGCCGC TGCCGGCGGC 
TATTTCCTGC TGCGCCAGCG CGCACCGGCG GAGCCTGCCG CAGCCGCCGC GCCGGTGCCG 
GAGAAGCCGA TCTTCGTGAC GCTGGAGCCG CTCACCGTCA ACGTGCAGTC CGAAGGCCGC 
GGCCGCTTCC TGCACGTGGG CGTGGCCCTC AAGGTGCACG ACGAACAGGC CAAGGCGCGC 
ATCGTCGAAT TCATGCCCGA GATCCGCAGC CGGGTGCTGC TGCTGCTGTC GAACCGCCCG 
CCCGAATCGC TGGTGACGAC CGCCGACAAG GCCCGCCTGG CCGAGGAGAT CCGCGTCGAG 
CTGAGCCGCC CGCTGGGCGC GGGCCTGCCG CCGCAGGAGA TCGCCAGCGT GTCCTTCAAC 
ACCTTCGTGG TGCAGTAA 

 

Protein sequence

MATSPPVALA PVPPSPARPS KLWIVLLIVA LVGALAAAGG YFLLRQRAPA EPAAAAAPVP 
EKPIFVTLEP LTVNVQSEGR GRFLHVGVAL KVHDEQAKAR IVEFMPEIRS RVLLLLSNRP 
PESLVTTADK ARLAEEIRVE LSRPLGAGLP PQEIASVSFN TFVVQ