| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4173 |
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| Symbol | |
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| ID | 7971910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4414995 |
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| End bp | 4416353 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644794759 |
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| Product | flagellar hook-length control protein |
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| Protein accession | YP_002946052 |
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| Protein GI | 239817142 |
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| COG category | [N] Cell motility |
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| COG ID | [COG3144] Flagellar hook-length control protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.717786 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTTCCC CCATTGCCCC TTCCTTCAGC CCGAACGCGG CTGCCTCCGC GGCTTCTTCC
ACCGCCGCCG GTGCACGCGG CCGCAACGCC GAGGAGCCCG GCGGCCGCAG CTTCGATGCG
GCGCTGGCCC GCTCCCGCAA CGCGGGCGCA GCGCAGGCGC CGGAAGACGC CGAATCGTCC
GCGCTCGAAA GCACGCACCG CCGAAAGGCA TCGCGCGCCG GCGACCGCAA GGACGAGCTC
CCCGCCGAGT TGCTGCCGAT GTCCTTCTTC GCGCCGCTGG TAGCGCCGCA AACCGCCGCC
ACCGCTGCGC TTGTAGCCGG TGCATCCGCG GCGGCCTCGA TGCCCGATGG CATCCAGGCC
CTGGTGCCGG GCGATGCGCC GGTCGACACG CTGGCAGGTG ATACCGCGGA CGCTGCGGCA
GGCAAGACGG CCATCGCGGC GGATGCCGAA GACGAAAGCA CCGCGTCGGC GAAGCCAGCA
GACGGTGCGC AACAGTCCAC GGCCCCGGAC ACCGCGCAGC CGGCGGATGC GCGCGCCGCC
GTGCAGGCCG CAGCCGCCGT GCCGCCGCCG GCCTCTGCTG GCACGGCCCC GGCCGCGATC
CCGGCTGCCG ATGCTGCAGC ACCCGACGCC GCCACCAGCA CCGCCGCGGC TTCCGCAGCA
GCAGCCACTG AAACGCGCGG CGCATCCACC GCCTCTCTTT CCGCCGATGC CGACACCGAC
TCGGCACCGG CCACCGCCAT GATCTCCGCC GACAAGACCG CCGACCTGGC CGCCGCCTCC
GACGCGGCGC CCACTTCCAC CAGCGTGGCC ACCGCGATGC CGTTCACGCC GGCCGCGGCC
GCTGCCGCGC GCACGAACGT GCCGCCGGCT TCGCCGCACA CGCCCATCCT CAGCGTGGAG
CCGTCCGTCG GCTCGGCCGC CTGGGGCAAG GCCATCGGCC ACCAGGTGCT GCGCATGACC
GCGGCGGGCT ACCAGGTGGC CGAGCTGAAC CTGAACCCGG CCGGCCTCGG CCCGCTCAAG
GTCACGCTCA CCATGGGCGA CAACCAGGCG CAGGCGATGT TCGCCTCGGC CCACGAAAGC
GTGCGCAAGG CGCTCGAGGT GGCCTTGCCG CAATTGCGCA CCAGCCTTGC CGACCACGGC
ATCAGCCTGG GCCAGGCCTC GGTCGGCGCG GAATCGCATC CCTTCGCCGG CCAGGGCGGC
GCCTTCGGCC AGCCGCCCCC GCAGCAGGGA TCGCCGCGGC AGGCCGACTA CCCGGGCACC
AGCCGCGTGC CAGCCATTGC CACCACCGAG CCGCTGCGCA GCATGCCGGC GCCTGCTGCG
CTTCGCCGGC CCAGTGCCGG CGTCGACACC TTCGCATGA
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| Protein sequence | MPSPIAPSFS PNAAASAASS TAAGARGRNA EEPGGRSFDA ALARSRNAGA AQAPEDAESS
ALESTHRRKA SRAGDRKDEL PAELLPMSFF APLVAPQTAA TAALVAGASA AASMPDGIQA
LVPGDAPVDT LAGDTADAAA GKTAIAADAE DESTASAKPA DGAQQSTAPD TAQPADARAA
VQAAAAVPPP ASAGTAPAAI PAADAAAPDA ATSTAAASAA AATETRGAST ASLSADADTD
SAPATAMISA DKTADLAAAS DAAPTSTSVA TAMPFTPAAA AAARTNVPPA SPHTPILSVE
PSVGSAAWGK AIGHQVLRMT AAGYQVAELN LNPAGLGPLK VTLTMGDNQA QAMFASAHES
VRKALEVALP QLRTSLADHG ISLGQASVGA ESHPFAGQGG AFGQPPPQQG SPRQADYPGT
SRVPAIATTE PLRSMPAPAA LRRPSAGVDT FA
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