| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4170 |
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| Symbol | |
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| ID | 7971907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4412353 |
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| End bp | 4413066 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644794756 |
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| Product | flagellar assembly protein FliH |
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| Protein accession | YP_002946049 |
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| Protein GI | 239817139 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1317] Flagellar biosynthesis/type III secretory pathway protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.299024 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTTCGT CTGACGCCTT TCCTGCCGCC GCGCGCCCGC GCCTGTCCGC CTGGCAGCGC
TGGGAGATGG GCGCGATCGA CGCGGATGCG CTCGCGGCGC GCAGCGCCGG CATCGAGGTG
CCCGCCGCGC CGCGCGTGGA CCCGGCCGCG CTGGCACGCG AGGCCGAGCT CGAACGCCTG
CGGCTGGAAG CGCGCGCCAC CGGCGAGGCC GAAGGCCGCC GCGAGGGCTG GGCCCAGGGC
CATGCCGAAG GGCGCGCCGA AGGCCTGGCG GCCGGCCTGG CCGCGGCCAG CGCGCATGCC
GAGCAGTTGC GCGCACTGGC CGCCTCGCTG CCGGCCGCAT TGCGCAGTGC CGAGAGCGAG
CTGGCCGATG CCATCCTGGT GCTCGCGCTC GACGTCGCGC GCCAGGTGAT CCACCGCACC
CTGCGCGTCG AGCCCGAATG GGTTCTTGCG CTGGTGCAGG ACCTGCTGCA CACCGAACCC
GCGCTGCAGG GCGAACCGCG CCTGCTGCTG CATCCCGAAG ACCTGGCACT GGTGAAGAAC
AGCCTCGGCG GCGAACTGCA GACCGCCGGC TGGCAGCTGC GCGCCGACGA CACCCTGGCC
CGCGGCGGCT GCCGCGTGCG CTCCGCGAGC GGCGAGATGG ACGCCTCGCT CGAGACCCGC
TGGAAGCGCG TGGCCGGCGC CTTCTCGCGC GATGCCGAAC CCGATGGAGC CTGA
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| Protein sequence | MISSDAFPAA ARPRLSAWQR WEMGAIDADA LAARSAGIEV PAAPRVDPAA LAREAELERL
RLEARATGEA EGRREGWAQG HAEGRAEGLA AGLAAASAHA EQLRALAASL PAALRSAESE
LADAILVLAL DVARQVIHRT LRVEPEWVLA LVQDLLHTEP ALQGEPRLLL HPEDLALVKN
SLGGELQTAG WQLRADDTLA RGGCRVRSAS GEMDASLETR WKRVAGAFSR DAEPDGA
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