Gene Vapar_4163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_4163 
Symbol 
ID7971900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp4405268 
End bp4405546 
Gene Length279 bp 
Protein Length92 aa 
Translation table11 
GC content70% 
IMG OID644794749 
Producthypothetical protein 
Protein accessionYP_002946042 
Protein GI239817132 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCTCA TGGCTTCGCT GGCCCGCGCG AGGGAATGGG ACCGGCTGCC CGAGCTCGAA 
GCCCGCTGTG CGCAGCTGGT CGACCGGCTC AAGGCCGTGG GCGCGGTGTC GCTCGATGCC
GCGCAGCTGG AACAGGTGCG CGGACTGATC GCCCGCATCC ACGCCGACCA GGACGAGGTG
TGCGCGCTGG TCAAGCCGCA GCTGGAGCGC CTGGTGGCCA AGATGGCCCA GCTGCAGAAC
CGCAGCGATC TTGGCAAGGC CTACGGCCTG CCGCACTGA
 
Protein sequence
MSLMASLARA REWDRLPELE ARCAQLVDRL KAVGAVSLDA AQLEQVRGLI ARIHADQDEV 
CALVKPQLER LVAKMAQLQN RSDLGKAYGL PH