Gene Vapar_4161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_4161 
Symbol 
ID7971898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp4403793 
End bp4404086 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content66% 
IMG OID644794747 
Productflagellar biosynthesis protein 
Protein accessionYP_002946040 
Protein GI239817130 
COG category[S] Function unknown 
COG ID[COG2257] Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACCC CCGCGCAACC GCGCCAGAGC GCAGTGGCGC TGTCCCATGC CGACACCGCA 
AAGGCGCCGG TGGTCGTGGC CAAAGGCTAT GGCGTGACGG CGGAATCGAT CCTGCGGCAG
GCGCGCGAGA ACGGTGTCTA CGTGCACGCC TCGCCGGACC TGATCCGGTT GCTGATGCAG
GTGGACCTCG ATCGGCAGAT TCCGCCCCAG CTCTATCTGG CGGTGGCCGA GGTCATGGCA
TGGATCCACG GAATCGAGAA CGGCAGGGGC CAGGCGGCAG GGCGATTCGA TTAA
 
Protein sequence
MTTPAQPRQS AVALSHADTA KAPVVVAKGY GVTAESILRQ ARENGVYVHA SPDLIRLLMQ 
VDLDRQIPPQ LYLAVAEVMA WIHGIENGRG QAAGRFD