Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4161 |
Symbol | |
ID | 7971898 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 4403793 |
End bp | 4404086 |
Gene Length | 294 bp |
Protein Length | 97 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644794747 |
Product | flagellar biosynthesis protein |
Protein accession | YP_002946040 |
Protein GI | 239817130 |
COG category | [S] Function unknown |
COG ID | [COG2257] Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGACCC CCGCGCAACC GCGCCAGAGC GCAGTGGCGC TGTCCCATGC CGACACCGCA AAGGCGCCGG TGGTCGTGGC CAAAGGCTAT GGCGTGACGG CGGAATCGAT CCTGCGGCAG GCGCGCGAGA ACGGTGTCTA CGTGCACGCC TCGCCGGACC TGATCCGGTT GCTGATGCAG GTGGACCTCG ATCGGCAGAT TCCGCCCCAG CTCTATCTGG CGGTGGCCGA GGTCATGGCA TGGATCCACG GAATCGAGAA CGGCAGGGGC CAGGCGGCAG GGCGATTCGA TTAA
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Protein sequence | MTTPAQPRQS AVALSHADTA KAPVVVAKGY GVTAESILRQ ARENGVYVHA SPDLIRLLMQ VDLDRQIPPQ LYLAVAEVMA WIHGIENGRG QAAGRFD
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