| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4159 |
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| Symbol | |
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| ID | 7971896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4402648 |
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| End bp | 4403256 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644794745 |
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| Product | transcriptional activator FlhC |
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| Protein accession | YP_002946038 |
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| Protein GI | 239817128 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGCGCA AGAGCGTGCT GGGCGAGGTG CGGGAAGTGC AGCTCGCGAT CCAGCTGATC
CAGCTGGGCG CCCGCCTGCA GTTCCTGGAG TCGGAGGTGG GCCTGAGCCG CGAGCGGCTG
ATCCGCCTCT ACAAGGAAAT CAAGGGGGTT TCACCGCCCA AGGGATTGCT TCCATTTTCA
ACCGATTGGT ATATGACGTG GCTGGCGAAT ATCCATTCGT CAATGTTTTA CAACATGTAT
CAATTCATGA AAATTCATTC GGACGAAGAA AAAGTCTGGA TATTGATTAA AAGCTACAAG
CTTTATTTGC AGCAAATTGC AGCGCAGGAC AGCGAGCCAA TTCTGGATTT CACGCGCGCC
TACACGATGG TGCGCTTTTT CGACAGCGAC ATGCTGCAGC TGAGCACCTG CTGCCGCTGT
TCGGGCCAGT TCGTCGCGCA TGCGCACGAC CACAAGAGCG GCTACGTGTG CGTGCTCTGC
AGGCCGCCGT CGCGCGCGGG CAAGGCGCGC GGCGCCAAGC GCGGCGCTGA GGGCGAGGCC
GGCGCGCTCG GCATCGAAGG CATGGGTTTT GGCGTGGAGG CGGCGCCGGG CGGCGCGGGC
TTCCACTGA
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| Protein sequence | MTRKSVLGEV REVQLAIQLI QLGARLQFLE SEVGLSRERL IRLYKEIKGV SPPKGLLPFS
TDWYMTWLAN IHSSMFYNMY QFMKIHSDEE KVWILIKSYK LYLQQIAAQD SEPILDFTRA
YTMVRFFDSD MLQLSTCCRC SGQFVAHAHD HKSGYVCVLC RPPSRAGKAR GAKRGAEGEA
GALGIEGMGF GVEAAPGGAG FH
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