| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4157 |
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| Symbol | |
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| ID | 7971894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4400758 |
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| End bp | 4401705 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644794743 |
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| Product | OmpA/MotB domain protein |
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| Protein accession | YP_002946036 |
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| Protein GI | 239817126 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1360] Flagellar motor protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACCG AAAAGCACAG GGTCGTGGTC AGGCGCGTGG CCGCCCATGG GGGCGGCGGG
CACGGCGGCG GCTGGAAGAT CGCCTATGCC GACTTCATGA CCGCCATGAT GGCGTTCTTC
CTCGTGATGT GGCTCTTGTC CAATACCTCG CCGAAGCAGC GCGAGGGCAT CGCCGAGCAC
TTCCGCATGC CGCTGAAGGT GGCGCTCAGC GGCGGCGAGA AGAGCAGCAC CAGCATCAGC
GTGGTGCCCG GCGGCGGCAT GGACCCGAGC ACGCGGGCCG ACGGCGAGGT GCAGCGCGCC
GACGCCGAGG ACGACGCCGA TGCGGACCGC CTGGCCAGCA TGAAGGAGCG GCTGGACAAG
CTCATCGAGA ACAGCCCGGT GTTCCGCCAG TTCCGCTCGC AGATCCTGAT CGACATCACG
ACCGAGGGCC TGCGCCTGCA GATCGTCGAC AACGAGAACC GCCCGATGTT CGACCTGGCC
AGCGCGCAGG TGGTGCCGCA CATGCGCGCC ATCCTGCGCG AGCTCGGCCC CACGCTCAAC
GAGCTGCCCA ACAAGATCAC GCTGTCGGGC CACACCGATG CCTTCGTCTA CAGCAACGGC
GACCGCTCCT ACGGCAACTG GGAGCTGTCG GCCGACCGGG CCAACGCCTC GCGGCGCGAA
CTGGTGATGG GCGGCATGGC CGAGAACAAG GTGCTGCGCG TGGTCGGCCT GGCCGACAGC
ATGCACCTGG ACCGCAGCAA TCCGCGCAAC CCGATCAACC GGCGCATCAG CATCATCCTG
CTGAACCACC GCACCCAGCA GCAGATCGAG AACGAGAACA GCGGCGGTGG GGGCGCCGGC
GCCATCCTGC CGGCAAGGGC GAAGGCTTCG CCGCCGCCAC TGCTTTCCGC GCCCACCGAC
AACCTCAAGG TGACCGTCAA AGGTTCGCCG GCAGCCACGC ACCCCTAA
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| Protein sequence | MSTEKHRVVV RRVAAHGGGG HGGGWKIAYA DFMTAMMAFF LVMWLLSNTS PKQREGIAEH
FRMPLKVALS GGEKSSTSIS VVPGGGMDPS TRADGEVQRA DAEDDADADR LASMKERLDK
LIENSPVFRQ FRSQILIDIT TEGLRLQIVD NENRPMFDLA SAQVVPHMRA ILRELGPTLN
ELPNKITLSG HTDAFVYSNG DRSYGNWELS ADRANASRRE LVMGGMAENK VLRVVGLADS
MHLDRSNPRN PINRRISIIL LNHRTQQQIE NENSGGGGAG AILPARAKAS PPPLLSAPTD
NLKVTVKGSP AATHP
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