| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4156 |
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| Symbol | |
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| ID | 7971893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4398660 |
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| End bp | 4400714 |
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| Gene Length | 2055 bp |
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| Protein Length | 684 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644794742 |
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| Product | CheA signal transduction histidine kinase |
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| Protein accession | YP_002946035 |
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| Protein GI | 239817125 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.847585 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCTCA GTCAGTTCAC ACAGGCATTT TTTGTCGAAG CCGTCGAGCT TCTGGCGCAG
ATGGAGCAGC TGCTTCTCGA GCTGGACGCC GAGGCGCCCG ACAGCGAGCA GCTCAACGCC
ATCTTCCGTG CCGCGCATTC GATCAAGGGC GGCGCGGCCA CCTTCGGCTT CGTCGCGCTG
ACCGACACCA CCCATCTTCT GGAAACCCTG CTGGACCGCG CGCGCCACGG CCAGCTGACG
CTGAGCCGCT CGATGATCGA TTCATTCCTG GAAACGAAGG ACGCCTTGCA AGAACAACTG
ATCGCCTACC AGACCGAGAA CGAACCCGAC CCCGAGCGCG TGGCGCACAT CTGCGAGGTG
CTGCGCCAGC TGGCGCTGGA GAGCGGCGGT GCCCAGGCAG CGCCTGCACC GGCATCCGTG
CCTGCGCCCG TGCCCGCCGC CATGCCCGTT GCTGCCGCCG CTGCCGTGCC TGCGGCGGGC
GGGGCGCTGC GCATCCGCTT CTCGCGCCTG TCCGACAGCG AGTGCGAGCT GCTCGCCGAC
GAGCTCGGCA ACCTCGGCAA GCTGCTGTCG CGCACGCGCA GCGGTGACCA GCTCACGGTG
CTGCTCGACA CCAGCTGCGC GCCCGACGAC ATCGTGGCCG TGTGCTGCTT CGTCATCGAC
GAGTCTCAGA TCGAGATCAC GGCCGAGCCC GCGGGCGGCG ATGCGGCTCC TGCGGCCGCG
CCCATTGCAG CGGCGCCGGC CGCACCGGCG GCCGCGGCAC CACAGCCGGC CGCGCCGGCG
GCCAGCGCGG CGCCCAGGGC GGCCTCCGCT TCGGCCGCCG CAGCAGGCGC CAAGGATTCG
AGCTCGATCC GCGTCGACGT GGAAAAGGTC GACCAGCTCA TCAACCTGGT GGGCGAGCTG
GTGATCACGC AATCGATGCT CACGCAGGCC GCCACCATGC TCGACCCGGT GGAGTGCGAG
CGCTTCCTGA GCGGCCTCGG CCACCTGGAG CGCAACGCGC GCGACCTGCA GGAATCGGTG
ATGTCGATCC GCATGATGCC GATGGACTAC GTCTTCAGCC GCTTCCCGCG CGTGATCCGC
GACGTCAGCG CCAAGCTCGG CAAGGAAGTG CGGCTGGACA CCTTCGGCAA GGAAACCGAG
CTCGACAAGG GCCTGATCGA ACGCATCATC GATCCGCTCA CGCACCTGGT GCGCAACAGC
CTGGACCACG GCATCGAAAC GCCCGCGCAG CGCATCGCCA AGGGCAAGGA AGCCGAAGGG
CAGCTGCTGC TGTCGGCGCA GCACCATGGC GGCAACATCG TGATCGAGGT CAGCGACGAC
GGCGCGGGCC TGAACCGCCA GAAGATCCTC GCCAAGGCCA TGCAGCAGGG CCTGCCCGTG
ACCGACACCA TGCCCGACGA CGAGGTGTGG CAGCTGATCT TCGCGCCCGG CTTTTCCACG
GCCGAGCAGG TCACCGACAT CTCGGGCCGC GGCGTTGGCA TGGACGTGGT CAAGCGCAAC
ATCCAGGAGA TGGGCGGGCA TGTGGAGATC AGCTCGCGCG AGGGCTGGGG CACCACCACC
CGCATCGTGC TGCCGCTCAC GCTGGCCATC CTCAACGGCA TGTCGGTCAA GGTGGGCAGC
GAGGCCTACA TCTTGCCGCT GAGCTACGTG ATCGAGTCGC TGCAGCCGCG CACCGAGCAC
CTGCACTCGA TCACCAGCGA CGGCCATGTG ATCAAGGTGC GCGGCGAGTA CCTGCCGCTG
ATCGAGCTGC ACGGCGTGTT CGACGTGGCC GGCGCGCAGA CCGATCCGAC CCAGGGAATA
TTGGTGATCG TGCAGGCCGG CGAGACGCGC TTCGCGCTCC TGGTGGACGA GCTGCTCGGC
CAGCACCAGG TGGTGGTCAA GAACCTGGAG ACCAACTACC GCAAGGTGCC GGGCATTTCG
GCCGCCACGA TCCTGGGCGA CGGCAGCGTG GCTTTCATCA TCGACGTCGA TGCCATGCCG
CGCATCCAGC GCGCGCACGT GGAGCGCGCC ACCGTGCTGG CCCGTGCGGC GCGCACGGAG
CCGGTCGCGG CCTGA
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| Protein sequence | MDLSQFTQAF FVEAVELLAQ MEQLLLELDA EAPDSEQLNA IFRAAHSIKG GAATFGFVAL
TDTTHLLETL LDRARHGQLT LSRSMIDSFL ETKDALQEQL IAYQTENEPD PERVAHICEV
LRQLALESGG AQAAPAPASV PAPVPAAMPV AAAAAVPAAG GALRIRFSRL SDSECELLAD
ELGNLGKLLS RTRSGDQLTV LLDTSCAPDD IVAVCCFVID ESQIEITAEP AGGDAAPAAA
PIAAAPAAPA AAAPQPAAPA ASAAPRAASA SAAAAGAKDS SSIRVDVEKV DQLINLVGEL
VITQSMLTQA ATMLDPVECE RFLSGLGHLE RNARDLQESV MSIRMMPMDY VFSRFPRVIR
DVSAKLGKEV RLDTFGKETE LDKGLIERII DPLTHLVRNS LDHGIETPAQ RIAKGKEAEG
QLLLSAQHHG GNIVIEVSDD GAGLNRQKIL AKAMQQGLPV TDTMPDDEVW QLIFAPGFST
AEQVTDISGR GVGMDVVKRN IQEMGGHVEI SSREGWGTTT RIVLPLTLAI LNGMSVKVGS
EAYILPLSYV IESLQPRTEH LHSITSDGHV IKVRGEYLPL IELHGVFDVA GAQTDPTQGI
LVIVQAGETR FALLVDELLG QHQVVVKNLE TNYRKVPGIS AATILGDGSV AFIIDVDAMP
RIQRAHVERA TVLARAARTE PVAA
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