| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4155 |
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| Symbol | |
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| ID | 7971892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4397316 |
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| End bp | 4398632 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644794741 |
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| Product | putative signal transduction protein |
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| Protein accession | YP_002946034 |
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| Protein GI | 239817124 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3434] Predicted signal transduction protein containing EAL and modified HD-GYP domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.78127 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTTTTG ATTTTTTCCG GCGCGCCGCG GCCGAGGAAA CGCCGGCAGC CGAAGCGGCC
CAAGGCCTGG CGATGCCGCG CAATGCAGAA GGCTTTGTGG CCTACACCTT GCTGCTCGAT
CCGCACAAGC GCGTCGCAGG CTACAAGCTC GCCTGGCGCG CGGCGGCCAG GCCCGAAGAA
GCGCCGGATG CGATCAGCCA GTTCAAATCG CTCGTGGCCT GCGTGACCGA GCACCTCAAT
CCGCCGGACA CGCCATGGCG GCTGGGGCGC AGCGAACTGT TCTTCGACGT GAATGCCGAA
TTGCTGGCGC TGGGCGCGCT GCAGTCGCTG CCGCCTGAAT ACACCGTGCT GTGCGTGGAG
CTCGGCGACC TGGCCAACGA GGAGCTGCGG CCGATATTGC ACTTCCTGCA CGAGCAGGGG
TTCAGCTTCA TGCTGTGCCG CGCCAAGGCG CTGCCCGAAG ATCCCGAACT GCTCGGCCTG
GTGAGCCATT TCGACGTGGG TGCCGGCGAT CCCCTGCTGG TGGCGGCCGC CCGCGGCAAG
GAGCTGCCCG ACCACATGCC GATCCAGCCG ATCGCCACGC GCATGGCTTC GTGGAAAGAC
TTCGAAGCCT GCGCCGCCCG CCGCGTCGAC GTGTTCGCCG ACGCGAGCTG CGGCCTGCCG
CCGCCGCCTG CGGCGAGCAC CGGCAGCCAT GCGCTGCAGC CCGAGTCGGT GCTGATCATG
CGGCTCTTGC AGATGATCCA GCGCAACGAG GACCTGCGCG AGATCGAGGC CGCCCTCAAG
CGCGATGCCG CGCTCACCTA CCGGCTGCTG CGCCACATGA ACTCGCCGGC CGTGGGTGCC
GGTGTCGAGA TCCATTCGCT GCACCATGCG GTGACGATGC TCGGCTACTC GCCGCTGTTC
CGCTGGCTCT CGCTGCTGCT GGCCACCAGC AACCCCATGG GCAGCCCGCC CTTCATGATG
AAGAAGGCCA TCATGCGCGG CCGCTTCGTC GAACTGATGG GCGAGATCAT GCTGCCGCGG
GGCGAGTCGG ACAACCTGTT CGTGGTCGGC ATGTTCTCGC TGATCGACCA GCTGCTGGGC
ATTCCGATGC AGGAGGTGCT CAACAAGGTG CAGCTTTCCG ATTCGGTCCA GCAGGCCATC
CTCACGCGCG GCGGCGTGTA CGGCCCCTTC CTCTCGCTGG CCGAGGCCTG CGAGCTGGAC
ACGGGCGAGG CGGCGCGCTT GGCGGAGGCG CTGCTCCTGA GCGCGAGCCA GGTGAATGCC
GCGCATTTGT CGGCACTGGC CTGGTCGCAG GACGTGATCC CGGCCGAAGC CGCCTAG
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| Protein sequence | MRFDFFRRAA AEETPAAEAA QGLAMPRNAE GFVAYTLLLD PHKRVAGYKL AWRAAARPEE
APDAISQFKS LVACVTEHLN PPDTPWRLGR SELFFDVNAE LLALGALQSL PPEYTVLCVE
LGDLANEELR PILHFLHEQG FSFMLCRAKA LPEDPELLGL VSHFDVGAGD PLLVAAARGK
ELPDHMPIQP IATRMASWKD FEACAARRVD VFADASCGLP PPPAASTGSH ALQPESVLIM
RLLQMIQRNE DLREIEAALK RDAALTYRLL RHMNSPAVGA GVEIHSLHHA VTMLGYSPLF
RWLSLLLATS NPMGSPPFMM KKAIMRGRFV ELMGEIMLPR GESDNLFVVG MFSLIDQLLG
IPMQEVLNKV QLSDSVQQAI LTRGGVYGPF LSLAEACELD TGEAARLAEA LLLSASQVNA
AHLSALAWSQ DVIPAEAA
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