| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4154 |
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| Symbol | |
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| ID | 7971891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4396482 |
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| End bp | 4397303 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644794740 |
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| Product | MCP methyltransferase, CheR-type |
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| Protein accession | YP_002946033 |
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| Protein GI | 239817123 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG1352] Methylase of chemotaxis methyl-accepting proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.59164 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTCCG AATTCCTTTT CACCGACGGC GATTTTTCGC GCATTCGCAC GCTCATCCAC
CGGCGCGCCG GCATCGCGCT GGGCGAGCAC AAGCGGCAGA TGGTGTACAG CCGGCTCTCG
CGCCGGTTGC GCGAGCTCGG GCTGCCCGAA TTCTCGGCCT ACCTGGCCAT GCTGGAAGAC
AGCCGCGACG GCCAGGAGTG GCAGCTGTTC ATCAACTCGC TGACCACCAA CCTGACCTCG
TTCTTCCGCG AGGCACACCA CTTTCCGGTG CTCGCGGAAC TGGCGCGCAA GTGCAGCCAG
CCGCCTACCA TCTGGTGCGC GGCCGCATCG ACCGGCGAAG AACCCTATTC GATCGCGATC
ACGCTGATGG AGGCGCTCGG CGAGCGTGCG AGCGCTGCGC GCGTGATCGC CACCGACATC
GACACCGCGG TGCTGGCCCG CGCGTCGGCC GGCGTCTTCA CGATGGAGCA GGTCAACCGC
ATGTCCACCG AGCGCCTGCG GCGCTTCTTC AACAAGGGCA CCGGCGCGAA CGCCGGCAAG
GTGCGGGTGC GCCCCGAGGT GGCCGCCATG GTCAAGTTCT CGCGGCTCAA CCTGCTCGAT
GCGTCATGGC CCGTGAAGGA GCCGGTGGAT GCGATCTTCT GCCGCAACGT GATGATCTAT
TTCGACAAGC CCACGCAGAA GAAGCTGCTC GACCGCTTCA TGCCGCTGCT CAAGCCGAAC
GGGCTGCTGT TCGCAGGGCA TTCGGAGAAC GCCTCGCTGG TCAACCAGAG CTTCAAGACG
GTCGGGCAGA CGGTGTACGC GCTGGGCAAG GCGCGTACAT GA
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| Protein sequence | MTSEFLFTDG DFSRIRTLIH RRAGIALGEH KRQMVYSRLS RRLRELGLPE FSAYLAMLED
SRDGQEWQLF INSLTTNLTS FFREAHHFPV LAELARKCSQ PPTIWCAAAS TGEEPYSIAI
TLMEALGERA SAARVIATDI DTAVLARASA GVFTMEQVNR MSTERLRRFF NKGTGANAGK
VRVRPEVAAM VKFSRLNLLD ASWPVKEPVD AIFCRNVMIY FDKPTQKKLL DRFMPLLKPN
GLLFAGHSEN ASLVNQSFKT VGQTVYALGK ART
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