| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4152 |
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| Symbol | |
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| ID | 7971889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4394756 |
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| End bp | 4395835 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644794738 |
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| Product | chemotaxis-specific methylesterase |
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| Protein accession | YP_002946031 |
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| Protein GI | 239817121 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG2201] Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.412207 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAAA TCAAGGTACT TTGCGTCGAC GACTCGGCGC TGATCCGCAG CGTGATGACC
GAGATCATCA ACAGCCAGGC CGACATGACG GTGGTCGGCA CCGCGGCCGA TCCGCTGCAG
GCGCGCGACC TCATCAAGGT GACGAACCCC GATGTGCTCA CGCTCGATGT CGAGATGCCG
CGCATGGACG GCCTCGAATT CCTCGAGAAG CTCATGCGCC TGCGGCCGAT GCCGGTGGTC
ATGGTGTCGT CGCTGACCGA GCGCGGCTCG GAGATTGCGC TGCGCGCGCT GGAGCTGGGC
GCGATCGATT TCGTGACCAA GCCGCGGCTT GGCGTGCGCG ACGGCCTCTT GCAATACACC
GAGCTGATCG CCGGCAAGAT CCGCACGGCC GCCGCGGCGC GGCTGCTGCC GGGCCGGCAC
GGCGCGTCGG CCAAGAGTGC GGGCGAAAAC CCGCAGGAGC CGTTACTGCG CAGCCCGCTC
CTGAGCACCG AGAAGCTCAT CATCATCGGC GCCTCCACCG GCGGCACCGA GGCCATCCGC
GAGGTGCTGC TGCCGCTGCC GCCCGATGCG CCCGCGGTGC TCATTGCGCA GCACATGCCG
GCCGGCTTCA CGCGCTCGTT CGCGCAGCGC CTGAACGGCC TGTGCCGCAT CACCGTGAAG
GAAGCCGAGC ATGGCGAACG CGTGCTGCCG GGCTACGCCT ACATCGCGCC TGGCGGCTTT
CACCTGTCGC TCGGGCGAAG CGGCGCCAAC TACGTGGCGC AGCTCGACCA GGAGCCGCCG
GTGAACCGCC ACCGCCCCTC GATCGACGTG CTGTTCGATT CGGCCGCCAG GCACGCCGGC
AAGAACGCGA TCGGAATGAT CCTCACGGGC ATGGGCCGGG ACGGCGCCGA AGGCCTGCTG
CGCATGAAGC AGGCCGGTGC CTACACCTTT GCGCAGGACG AGGCCAGTTG CGTGGTCTTC
GGCATGCCGC GCGAGGCCAT CGCATTGGGC GCGGCCGATG AAGTGGCGCC GCTGGCAGAG
ATGGGACGCC GCGTGCTGGC CCATCTGCGC ACCTTCGGCG AACGCACGAA CCGGGTTTGA
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| Protein sequence | MKKIKVLCVD DSALIRSVMT EIINSQADMT VVGTAADPLQ ARDLIKVTNP DVLTLDVEMP
RMDGLEFLEK LMRLRPMPVV MVSSLTERGS EIALRALELG AIDFVTKPRL GVRDGLLQYT
ELIAGKIRTA AAARLLPGRH GASAKSAGEN PQEPLLRSPL LSTEKLIIIG ASTGGTEAIR
EVLLPLPPDA PAVLIAQHMP AGFTRSFAQR LNGLCRITVK EAEHGERVLP GYAYIAPGGF
HLSLGRSGAN YVAQLDQEPP VNRHRPSIDV LFDSAARHAG KNAIGMILTG MGRDGAEGLL
RMKQAGAYTF AQDEASCVVF GMPREAIALG AADEVAPLAE MGRRVLAHLR TFGERTNRV
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