Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4151 |
Symbol | |
ID | 7971888 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 4394331 |
End bp | 4394729 |
Gene Length | 399 bp |
Protein Length | 132 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644794737 |
Product | response regulator receiver protein |
Protein accession | YP_002946030 |
Protein GI | 239817120 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.541325 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATTGACA AGAGCATCAA AATTTTGGTC GTGGACGACT TCCCGACCAT GCGGCGCATC GTGCGCAACC TGCTGAAGGA ACTCGAGTTC CTGAACGTCG ACGAAGCCGA AGACGGCGCC GCCGGCATCG AGAAGCTGCG CGGCGGCAAC TTCGGCTTTG TGGTGTCGGA CTGGAACATG CCCAACATGG ACGGCCTCAC CATGCTGCAG ACCATCCGCG CCGACCCCGA GCTCGCCAAG CTGCCGGTGC TGATGGTCAC GGCCGAGGCC AAGAAGGAAA ACATCATCGC GGCCGCGCAG GCCGGCGCCA ACGGCTACGT GGTCAAGCCC TTCACGGCGG CCACGCTCGA GGAAAAGATC ACCAAGATCT TCGAGAAGCT CCAGAAAGAG GCGGCCTGA
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Protein sequence | MIDKSIKILV VDDFPTMRRI VRNLLKELEF LNVDEAEDGA AGIEKLRGGN FGFVVSDWNM PNMDGLTMLQ TIRADPELAK LPVLMVTAEA KKENIIAAAQ AGANGYVVKP FTAATLEEKI TKIFEKLQKE AA
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