Gene Vapar_4150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_4150 
Symbol 
ID7971887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand- 
Start bp4393673 
End bp4394329 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content67% 
IMG OID644794736 
Productchemotaxis phosphatase, CheZ 
Protein accessionYP_002946029 
Protein GI239817119 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG3143] Chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.667805 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACACG CTGCGCTCGA ACCCGCGGAG CACGGGAACA CGGCCGAAGA GTTGCTCGGG 
CGCATCGGGC ACCTGACCCG GCAATTGCGC GAAGGCCTGC GCGAACTGGG GCTGGACAAG 
CAGGTCGCCA AGGCCGCGCA GGCCATTCCC GATGCGCGCG ACCGCCTGGG CTACATCGCC 
TCCATGACCG AGCGGGCGGC GCACCGTGCG CTCAACGCCA TCGACCTGGC CCAGCCGCTG 
CAGGAAGACC TTGCAAGCAA CGCCAAGGGC CTGAGCCGGC GCTGGGACGA ATGGTTTGCC 
AACCCGGTCG AGCTGGACCA TGCGCGCCAG CTCGTGATGG ACACGCGCGG CTACCTGCAG 
GACGTGCCGC AGAAGGCCGG CGCCATCAAC ACGCAGCTGA TCGAGATCCT GATGGCGCAG 
GACTTCCAGG ACCTCACGGG CCAGGTCATC AAGAAGATGA TGGAAGTGGT CAACGACGTC 
GAGACCCAGC TGCTGCAGGT GCTGATCGAC AACTCGCACC TCGACAAGCA CGCCGAGAAG 
CGCCACGAGG CCGAAGCCAG CAGCCTGCAG AACGGCCCGC AGGTGGTGCC CGGCAACCCG 
GAGGCCGTCA CGGGCCAGGC GCAGGTCGAC GACCTGCTGG AGAGCCTCGG GTTCTGA
 
Protein sequence
MTHAALEPAE HGNTAEELLG RIGHLTRQLR EGLRELGLDK QVAKAAQAIP DARDRLGYIA 
SMTERAAHRA LNAIDLAQPL QEDLASNAKG LSRRWDEWFA NPVELDHARQ LVMDTRGYLQ 
DVPQKAGAIN TQLIEILMAQ DFQDLTGQVI KKMMEVVNDV ETQLLQVLID NSHLDKHAEK 
RHEAEASSLQ NGPQVVPGNP EAVTGQAQVD DLLESLGF