| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4149 |
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| Symbol | |
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| ID | 7971886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4393055 |
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| End bp | 4393594 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644794735 |
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| Product | protein of unknown function DUF925 |
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| Protein accession | YP_002946028 |
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| Protein GI | 239817118 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3575] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGGCCG CATCGGACGA GTTGATGGCC GCACTGCGGG CGGTCCGCTC GCTCGGGCTG
CGGTCCTGGT GCATTGGCGC CGGCGCGATC CGGTCCCTGG TGTGGGACAC CCTTCACGGG
TTCGACCGGC GCTTGGCCGT CGAAGACCTG GATGTCGTCT ACTTCGACGT GGAGGCCAGT
CCGGAGCACG ATGCCGGCCT TGAAAACCAG CTTCGTTCGG CCATGCCAGG CTTCAATTGG
GAAGTGACGA ATCAGGCGGC CGTGCACCGC TGGTTCGCCG CCGCCCTCGG CCAGGTGGTG
CCTCCTCTCG CATCGCTGGA AGAAGGCGTT GCAACCTGGC CGGAATTTGC CACCTGCGTC
GGTGTCTGGC TGAACGAGGA TGAATCGCTG GGCGTCGTCG CGCCGCATGG ACTCGATGAC
CTGTTCGCGC TGCGCGTCCG GCACAACCCC CTGCGTGCAA GCCTTGCGAC CTACCGGCAG
CGGGTTGCAG CGAAGCGGTT CGGCGAGCGG TGGCCGCGGC TTTTGGTCGA GATGGGCTGA
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| Protein sequence | MVAASDELMA ALRAVRSLGL RSWCIGAGAI RSLVWDTLHG FDRRLAVEDL DVVYFDVEAS
PEHDAGLENQ LRSAMPGFNW EVTNQAAVHR WFAAALGQVV PPLASLEEGV ATWPEFATCV
GVWLNEDESL GVVAPHGLDD LFALRVRHNP LRASLATYRQ RVAAKRFGER WPRLLVEMG
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