Gene Vapar_4148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_4148 
Symbol 
ID7971885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp4392590 
End bp4393018 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content62% 
IMG OID644794734 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_002946027 
Protein GI239817117 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.988819 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAACT TCGAGATCTA CACCCCCACG GCCGAGGAAG TGCACTCGGG CGAATTGGGT 
CGCCGCATGC GGCAGTTCAA CTACCGGTTT GTCGGCGAAT ACGGACAGGT GCAGCCGGTC
TGGGTCAGCG CGAAGGACCA GGACGGCGCG CTCGTAGGTG GCCTGCGCGG GTTTGTATTC
CTGCAATGGC TGAACGTGGA GTTGCTGTTC GTGGACGATG CAGCGAGGCG CCAGGGCGTG
GGCCGCAGGC TGCTCGCCAT GGCGGAACAC AAAGCCCGCG AGCTGGGCGC CCGCAATGCG
ACGTTGAACA CATTCGAATG GCAGGCCCGC GCGTTCTACC TCAAGCAGGG ATACGAAGAG
TTCGGGCGCA TCGACGACTA CATTCAGGGC TTCTACATGG CGTACATGAA GAAAGCGCTG
GAACCATAG
 
Protein sequence
MSNFEIYTPT AEEVHSGELG RRMRQFNYRF VGEYGQVQPV WVSAKDQDGA LVGGLRGFVF 
LQWLNVELLF VDDAARRQGV GRRLLAMAEH KARELGARNA TLNTFEWQAR AFYLKQGYEE
FGRIDDYIQG FYMAYMKKAL EP