| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4142 |
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| Symbol | flhF |
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| ID | 7971879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4386028 |
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| End bp | 4388382 |
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| Gene Length | 2355 bp |
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| Protein Length | 784 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644794728 |
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| Product | flagellar biosynthesis regulator FlhF |
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| Protein accession | YP_002946021 |
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| Protein GI | 239817111 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1419] Flagellar GTP-binding protein |
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| TIGRFAM ID | [TIGR03499] flagellar biosynthetic protein FlhF |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAACATCC CGACAGACGT CCGCACCAGC GCGCGCAAGT TCGTCGCGCC CACCAGCCGG
GAAGCACTGC GCCTGGCGCG CCAGGCGCTC GGCGACGAAG CCATCGTGTT GACCAACCGC
GTGACCGCCG AAGGCGTGGA GATCGTGGCC ATGGTGCAGG AGGACGTGGA AGGCGTGCGT
GCGAGCGCCG CTGCCGCGCC GCCGGCACCC CAGCCATTGC CGGCAGCCCT GGCGGCTCCT
GCGCCCGCCA TTGCATCCAT CGCCGCACCT GCCGCTGTCC CCGCGCCCCT GGCCGCGGAC
AGCGTGCTCG GCGAACTCCA TTCGATGCGC TGCATGATCG AGGAGCAGCT GGCCGGCGTG
GCCTGGAACG AGAAGCAGCG GCGCGATCCG ATGCGCGGGC GCCTCTTGCG CACGCTGCTG
GGCGCCGGCT TCAGCGCCCG CCTCTCCAAG GCCATGCTGG AGCACCTGCC CACGGGCCAG
AGCTATGCCC AGGGCATGGC CTTCGTGCGC TCCGAATTGA TCCGCACGCT CCCGGTGCAC
GAGGACGAGG ACGCGCTGCT GGCGCAGGGC GGCGTCTATG CGCTGATGGG CCCCACCGGC
GTCGGCAAGA CCACCACCAC GGCCAAGCTC GCGGCGCGCT GCGTGATGCG CTTCGGCGCC
GACAAGCTCG CGCTCGTCAC CACCGACAGC TACCGCATCG GCGCCTACGA GCAGCTGCGC
ATCTACGGCC AGATCCTCAA CGTGCCGGTC TACGCCGTGA AGGACGCCAC CGACCTGCAC
CTGGTGCTGC AGGACCTGCA GGGCAAGCAC ATGGTGCTGA TCGACACCGT GGGCATGAGC
CAGCGCGACC GCGCGGTGTC CGACCAGATC GCCATGCTCT GCAACAGCCA GCGGCCCGTG
AAGCGGCTGC TGCTGCTCAA CGCCACGAGC CACGGCGACA CGCTCAACGA GGTGGTGCAC
GCCTACCGCC ACGGCAGCGG CAGCGATCTC GCGGGCTGCA TCTTCACCAA GGTCGACGAG
GCCACGCACC CCGGCGCGCT GATCGACACC GTGATCCGCC ACCGCCTGCC GGTGCACTAC
GTCTCGAGCG GCCAGAAGGT GCCCGAGAAC CTGATGCGCG CCGACCGCGC CCAACTGGTG
GACAGCGCGT TCCAGGCCAA CAGCCGCAGC GCGCTGTTCG TGCCCGGCGA AGGCGACCTG
CAGGACGGAT CGGCGAATGC CGAGGCCTCC GCAGCCCACG CGGAGGCCGA ACGCCAGCGG
CTGCAGTACC GCCAGCTGAT CCGCGCCATG GCGCACGACG CGCAGGAAGT GGCCGCCGCG
GCCTCGGCAC TGGCGGCCGC GCCGCTCGGC TTCGAGCAGG CGCGCGCGCT CTGGCGGATG
GCCGCCGACG AGGACGTCGG CCACAAGGCG GTGCTGCAGG CGCTCATGGC GCATGCCGCG
AGCGAGATTG CCGCAAGCTG CGACACCCAC GTGCTGGCGC TCAGCGGCCA GGTCGGGCTC
AAGTCCGACG AAGGTGGCGA CGCCTACCAG TGCCAGGGCA GCCTGCTGCT GTCCGACCGC
GGCGGGCAGC CGCTCTCGGC GCCCAACCAA TGGCTTTCCA CCGCCGCGAC CCGCAGCGCC
GCCGACCCCA CGCGCAAGCC CGGCGTGCGG CAGGTGCAGT GGCTGCGCCA GCAGGACTTC
GGCAAGGCCG TGGTGCACAT GCTGCCGCGG CTGCCCGCGG CCGAGCTCAT GCTGCAGTGG
CAGGTGCAGC GCCAGCAATG GATGGCGCGC GCGCCGGGCT CCACGGCGGT GACCGATCCG
CGCACCGGCG AATACGCCAC GCTGACCGGC CTGGACTTCA GTTTCGGCGA GGCGCGCGCT
GTGGTCTTCA AGGGCCGTGC CGCGCTGCAA TCGGTGGCCG AGGCCCGCGT CACGCTGCGC
ACCGACGGCG GCCTGCCCGG CCTGCGCTGC ATTGCCACGC GCCTGACCGA TGCGCGCAGC
CACAAGCTGC TGGCGCAGAG CTATGCGCTC ACCAACATCG GCCGCGACAT CGGGCCGCAG
CAGCTCGCGC AGTGGCAAGG CTGGGCCGCC GAGGCCGAGC CCTGCCTGCG CCTGCTGCGC
CAGGGCCTCT CGGTGCTGGG CGGGCTTGGC GAGGCGGGCG ATCCGCACAT GATGAAGCGC
CTGCTCATCG CCGGCCAGGT GACCACCACC GTCTGGCGCC TGCAGCAGGC CGGCGGCGAC
TGGGCCGGCC GCACCCGCGC GCTGCTGTCG CAGCTGACCG GCCGTCCCGC GCGGCCCGGC
CGCCCCGTGT CGGGCAACGT GCTGTATGCC GGCGTGGGCA AGCTGTTCTT CCTGCTGGAG
GCGCTGGACA CGTGA
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| Protein sequence | MNIPTDVRTS ARKFVAPTSR EALRLARQAL GDEAIVLTNR VTAEGVEIVA MVQEDVEGVR
ASAAAAPPAP QPLPAALAAP APAIASIAAP AAVPAPLAAD SVLGELHSMR CMIEEQLAGV
AWNEKQRRDP MRGRLLRTLL GAGFSARLSK AMLEHLPTGQ SYAQGMAFVR SELIRTLPVH
EDEDALLAQG GVYALMGPTG VGKTTTTAKL AARCVMRFGA DKLALVTTDS YRIGAYEQLR
IYGQILNVPV YAVKDATDLH LVLQDLQGKH MVLIDTVGMS QRDRAVSDQI AMLCNSQRPV
KRLLLLNATS HGDTLNEVVH AYRHGSGSDL AGCIFTKVDE ATHPGALIDT VIRHRLPVHY
VSSGQKVPEN LMRADRAQLV DSAFQANSRS ALFVPGEGDL QDGSANAEAS AAHAEAERQR
LQYRQLIRAM AHDAQEVAAA ASALAAAPLG FEQARALWRM AADEDVGHKA VLQALMAHAA
SEIAASCDTH VLALSGQVGL KSDEGGDAYQ CQGSLLLSDR GGQPLSAPNQ WLSTAATRSA
ADPTRKPGVR QVQWLRQQDF GKAVVHMLPR LPAAELMLQW QVQRQQWMAR APGSTAVTDP
RTGEYATLTG LDFSFGEARA VVFKGRAALQ SVAEARVTLR TDGGLPGLRC IATRLTDARS
HKLLAQSYAL TNIGRDIGPQ QLAQWQGWAA EAEPCLRLLR QGLSVLGGLG EAGDPHMMKR
LLIAGQVTTT VWRLQQAGGD WAGRTRALLS QLTGRPARPG RPVSGNVLYA GVGKLFFLLE
ALDT
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