| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4137 |
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| Symbol | |
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| ID | 7971874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4378386 |
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| End bp | 4379393 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644794723 |
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| Product | ABC transporter related |
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| Protein accession | YP_002946016 |
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| Protein GI | 239817106 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGCAC TTTCCCTTCG CAACGTCATC AAGCGCTACG GCCATGGGCC GAAAGCCAAC
CAGGTCATCC ACGGCGTGAG CGCCGAGATC GCCGACCATG AATTCATCGT CATCGTCGGC
CCCTCAGGCT GCGGCAAATC CACCCTGCTG CGCATGGTGG CCGGCCTGGA GGAAATCTCG
GCCGGCGAAA TCTCCATTGG CGGGCGCGTG GTGAACCAGC TCGAACCCTC CGAGCGGGAC
ATCGCCATGG TGTTCCAGAA CTACGCGCTC TATCCGCACA TGAGCGTGTT CAAGAACATG
GCCTATGGCC TGAAGATCGC CAAGGTGCCG GAGCCGGAGA TCAAGACCCG CGTCGACAAG
GCGGCCAAGA TCCTGGAGCT GGGCCACCTG CTCGAGCGCA AGCCGCGCGA GCTCTCGGGC
GGGCAGCGCC AGCGCGTGGC CATGGGCCGC GCCATCGTGC GCCAGCCGCA GGTGTTCCTG
TTCGACGAGC CGCTGTCCAA CCTGGACGCC AAGCTGCGCG CGCAGACCCG CATCGAGATC
CAGAAGCTGC ACCGCGAGCT CGGCATCACC TCGCTGTTCG TCACGCACGA CCAGGTCGAG
GCCATGACGC TGGCGCAGCG CATCATCGTG ATGAACGGCG GCGTGATGGA CCAGTTCGCG
ACGCCCGAAG AGGTCTACAA CCGGCCCGCC ACCACCTTCG TTGCCAGCTT CATCGGCTCG
CCGCCGATGA ACCTGCTGCA GCACGCCCCC GGCGTGCGGC CCGGCCAGAT CCTGGGCATC
CGCCCGGAGC ACCTGACGCT GGACGAAAGC GGCTGGTCGG TGCAGGTGGA GTCGGTCGAA
CTGCTGGGCG CCGAGCGGCT GGTGTACGGC CGCATCGGCG AGGAGCAGAT CATCATGCGC
ACCGACGAAA GCGACCATCC GCCGGTCGCG GGCGACACCG TGAAGATCGC GGCGCGCGAG
GACAAGCTGC ACTGGTTCGA TGCCGGCTCC GGCAAGCGGG CCGACTGA
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| Protein sequence | MAALSLRNVI KRYGHGPKAN QVIHGVSAEI ADHEFIVIVG PSGCGKSTLL RMVAGLEEIS
AGEISIGGRV VNQLEPSERD IAMVFQNYAL YPHMSVFKNM AYGLKIAKVP EPEIKTRVDK
AAKILELGHL LERKPRELSG GQRQRVAMGR AIVRQPQVFL FDEPLSNLDA KLRAQTRIEI
QKLHRELGIT SLFVTHDQVE AMTLAQRIIV MNGGVMDQFA TPEEVYNRPA TTFVASFIGS
PPMNLLQHAP GVRPGQILGI RPEHLTLDES GWSVQVESVE LLGAERLVYG RIGEEQIIMR
TDESDHPPVA GDTVKIAARE DKLHWFDAGS GKRAD
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