| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4136 |
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| Symbol | |
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| ID | 7971873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4377394 |
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| End bp | 4378245 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644794722 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_002946015 |
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| Protein GI | 239817105 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTGAGA AACGCGGCAC CCACGGCATC CTGGCCCATG TGGTGATGAT CCTGGGCGTG
TTCATCGTCG CCTTCCCGCT CTACCTCGCG TTCGTGGCGT CCACCCACAC GGCGCAGGAG
ATCGTGCAGG CGCCGATGCC GCTGCTGCCC GGCACCAACA TGCTGGACAG CTACAAGGGC
GCGCTCTTCG GGCGCGAAAC CAGCAGCGGC TCCAACGCGC CCGTGGCCCA CATGATGTGG
GTGAGCCTGG TGACGGCGCT GGTGATCTCC ATCGGCAAGA TCTCCATCTC GCTGCTGTCG
GCCTTTGCCA TCGTCTACTT CCGGTTCCCG TTCAAGAAGA TCTGCTTCTG GGCCATCTTC
GTGACGCTGA TGCTGCCGGT GGAGGTGCGC ATCCTGCCCA CCTACAAGGT GCTGTCCGAT
CTGAACATGC TGAACACCTA CGCGGGCCTC ACGGTGCCGC TGATCGCGTC GGCCACCGCC
ACCTTCCTGT TCCGCCAGTT CTTCCTGACG GTGCCCGACG AGCTCACCGA GGCCTCGCGC
ATGGATGGCG CAAGCCCCAT GCGCTTCTTC TTCGACGTGC TGCTGCCGCT GTCGAAGACC
TCGATTGCGG CGCTGTTCGT GATCCAGTTC ATCTACGGCT GGAACCAGTA CCTCTGGCCG
CTGCTCGCCA CCACCGGCGA AGACATGTAC CCCGTGGTGG TCGGCATCAA GCGAATGATT
GCCGGCGGCG ACAGCCAGAA CGAATGGAAC GTGGTGATGG CCACCGCCAT CCTCGCCATG
CTGCCGCCCG CGCTGGTGGT GGTGCTGATG CAGAAGTGGT TCGTCAAGGG CCTCGTGGAC
ACTGAGAAAT AG
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| Protein sequence | MVEKRGTHGI LAHVVMILGV FIVAFPLYLA FVASTHTAQE IVQAPMPLLP GTNMLDSYKG
ALFGRETSSG SNAPVAHMMW VSLVTALVIS IGKISISLLS AFAIVYFRFP FKKICFWAIF
VTLMLPVEVR ILPTYKVLSD LNMLNTYAGL TVPLIASATA TFLFRQFFLT VPDELTEASR
MDGASPMRFF FDVLLPLSKT SIAALFVIQF IYGWNQYLWP LLATTGEDMY PVVVGIKRMI
AGGDSQNEWN VVMATAILAM LPPALVVVLM QKWFVKGLVD TEK
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