Gene Vapar_4131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_4131 
Symbol 
ID7971868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand- 
Start bp4369088 
End bp4369525 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content69% 
IMG OID644794717 
Producthistidine triad (HIT) protein 
Protein accessionYP_002946010 
Protein GI239817100 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.190525 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGTGG AGAACTGTCC CTTCTGCGAA GGCCCCGGCG GCCGCATCGT GTTCGAGGGC 
GCGAAGCTTC GCGTCATCCA CGCCGAGGAG GCCGGCTTCC CGGCCTTCTA CCGCGTGATC 
TGGCGCGAGC ATGCGGCGGA GTTTTCCGAC CTCGACGCGG CCGACCGCGT GCTGTGCATG 
GAGGCGGTGA CGGTGGTCGA GCAGTGCCTG CGCGAGCATC TGTCGCCGGC CAAGATCAAC 
CTTGCGGCGC TCGGCAACAT GGTGCCGCAC CTGCATTGGC ACGTGATCGC GCGCTTTGCG 
GACGACACGC ATTTTCCGGG CTCCGTGTGG GCGCCGGTGC AGCGCCAAGC GGATGCGGCC 
CGGCAGGCCG CCGTGGCCGC GCGCCTGCCC GCGCTCGAGA GTGAGATGAT GGCCCGCCTG 
GGCACAAGGA GCTTCTGA
 
Protein sequence
MKVENCPFCE GPGGRIVFEG AKLRVIHAEE AGFPAFYRVI WREHAAEFSD LDAADRVLCM 
EAVTVVEQCL REHLSPAKIN LAALGNMVPH LHWHVIARFA DDTHFPGSVW APVQRQADAA 
RQAAVAARLP ALESEMMARL GTRSF