| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4129 |
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| Symbol | |
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| ID | 7971866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4367788 |
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| End bp | 4368519 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644794715 |
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| Product | ubiquinone/menaquinone biosynthesis methyltransferase |
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| Protein accession | YP_002946008 |
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| Protein GI | 239817098 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
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| TIGRFAM ID | [TIGR01934] ubiquinone/menaquinone biosynthesis methyltransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0406276 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCACCA CCCACTTCGG CTTCGAGAAA GTCGACGAAA GCGAGAAAGC GCAACGTGTC
CGCGGCGTCT TCGATTCCGT CGCCACGCGT TACGACCTCA TGAACGACCT GATGTCGATG
GGGCTGCACC GCGCCTGGAA GGCCTACACC GTGATGGTGG CCAACGTGGG CGAGGGCTCG
CGCGTGCTCG ACATCGCTGG CGGCACCGGC GACCTCGCGC TGGCCTTCTC GAAGAAGGTG
GGCGCCAGCG GCCAGGTGGT GCACACCGAC ATCAACGAAG CCATGCTGCG CACCGGCCGC
GACCGCCTGC TCGATGCCGG CGTGGCGCTC CCCACGCTGG TGTGCGACGC CGAGAAGCTG
CCGTTCCCCG ACAACCACTT CGACGTGGTG ACCGTGGCCT TCGGCCTGCG CAACATGACG
CACAAGGACC TTGCGCTGAA GGAAATGAAC CGCGTGCTCA AGCCGCGCGG CAAGCTGCTG
GTGCTCGAGT TCTCGAAGGT GGCCAAGCCG CTGGCCAAGG CCTACGACTG GTATTCGTTC
AACGTGCTGC CGCGCCTGGG CAAGCTGGTG GCCGGCGACG ACGCGAGCTA CCGCTACCTG
GCCGAATCGA TCCGCATGCA TCCCGCGCAG GACGAACTCA AGACCCTCAT GAAAGAGGGC
GGTTTCGGGC ATGTGGACTA TCACAACATG ACGGGGGGCG TGGTGGCCCT TCATGTTGGA
ATCAAATGTT GA
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| Protein sequence | MSTTHFGFEK VDESEKAQRV RGVFDSVATR YDLMNDLMSM GLHRAWKAYT VMVANVGEGS
RVLDIAGGTG DLALAFSKKV GASGQVVHTD INEAMLRTGR DRLLDAGVAL PTLVCDAEKL
PFPDNHFDVV TVAFGLRNMT HKDLALKEMN RVLKPRGKLL VLEFSKVAKP LAKAYDWYSF
NVLPRLGKLV AGDDASYRYL AESIRMHPAQ DELKTLMKEG GFGHVDYHNM TGGVVALHVG
IKC
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