| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4128 |
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| Symbol | |
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| ID | 7971865 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4366740 |
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| End bp | 4367753 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644794714 |
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| Product | import inner membrane translocase subunit Tim44 |
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| Protein accession | YP_002946007 |
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| Protein GI | 239817097 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4395] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0106946 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGTT TGAGTTCTTT GTTCCTGGCT TGCGTGCTGG CCCTGGTCAG CGTTCAGGCA
GACGCAGCTC GCATCGGTGG CGGCAAGTCG TTCGGCCGCC AGTCGTCCAA CGTGACGCAG
CGCGAATCCG CAGCACCCAC CGCACCCGCG CAGCAAAACG CGACCAATGC GGCGCCGAGG
CCTGCAACGC CCGCGCCCGC CGCCGCTGCG CCCAAGCGTC CGTGGGGCGC CATGCTCGGC
GGCCTCGCCG CCGGCCTGGG CCTCGCCTGG CTCGCACACT CGCTGGGCCT GGGTGCCGGC
TTTGCGAACA TCCTCCTGAT CGGCCTGCTC GTGATGGCCG GGCTGTTCGT CTGGCGCATG
TTCAAGGCGC GCTCGGCCGC ATCGTCGGGC GCCAACCGCC CGGGCGGCTT CGCATTCGAA
GGCGCCGGCA ATCCGGCCAA CGCCAGCGCG CCCGCGCAGT ACAGCCCCGC CAATGTCGGC
AACGATGCGT CGGCGCGTCC CTGGGAGCGC AACACGGCCG CCTTCGACGC CGGCTCCTCC
GCGCATGGCA GCAGCCTGTC CGCGGCCGGT GCGGCGGCCG GCGGCAGCAT GATCGGCTCG
GCGCTCTCGG GCTCGCAGTC GTGGGGCATT CCGGCCGGCT TCGACGTGGA CGGCTTCCTG
AGCGCCGCCA AGCGCAACTT CGTGACGCTG CAGGACGCAT GGGACCGCGC CGACGTCAGC
ATGCTGCGCT CGATGATGAC CGACGACATG GTCGAGGAAA TCCGCAGCCA GCTGGCCGAC
CGTGCGAGCC ACACCGGCGG CGCCTCGAAC AAGACCGAAG TGGTCATGCT CGACGCCAAG
CTGCTCGGCA TCGAGGAACT GGCCGACGCC TACCTCGCGA GCGTGGAGTT CTCCGGCATG
ATCCGCGAAG ATGCCTCGGC CGGCCCGGGC CCGTTCCGCG AAGTCTGGAA CATGACCAAG
CCCACCAGCG GCACCAGCGG CTGGCTCGTG GCGGGCGTCC AGGCCCTGCA GTAA
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| Protein sequence | MKSLSSLFLA CVLALVSVQA DAARIGGGKS FGRQSSNVTQ RESAAPTAPA QQNATNAAPR
PATPAPAAAA PKRPWGAMLG GLAAGLGLAW LAHSLGLGAG FANILLIGLL VMAGLFVWRM
FKARSAASSG ANRPGGFAFE GAGNPANASA PAQYSPANVG NDASARPWER NTAAFDAGSS
AHGSSLSAAG AAAGGSMIGS ALSGSQSWGI PAGFDVDGFL SAAKRNFVTL QDAWDRADVS
MLRSMMTDDM VEEIRSQLAD RASHTGGASN KTEVVMLDAK LLGIEELADA YLASVEFSGM
IREDASAGPG PFREVWNMTK PTSGTSGWLV AGVQALQ
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