| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4125 |
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| Symbol | |
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| ID | 7974447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4363105 |
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| End bp | 4364544 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644794711 |
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| Product | Na+/solute symporter |
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| Protein accession | YP_002946004 |
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| Protein GI | 239817094 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0765871 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTGCTGA CGCTGGTTGT CGTTTATCTG CTGGTCACCA TCGCGATCGG CCTGTACGCC
GCCAAGCGGG TGAAGAACAC CACCGACTTC GCCATCGCCG GGCGGCACCT GCCGCTCTAC
ATGATCGTGA CGACCACCTT CGCGACCTGG TTCGGTTCCG AAACGGTGCT CGGCATCCCG
GCCAAGTTCA TCGAGGGCGG GCTGAACGGG GTCATCGAAG ACCCGTTCGG CGCGGGCACC
TGCCTGATCC TGGTGGGCCT GTTCTTCGCG GGCAAGCTCT ACCGCATGAC GCTTTTGACC
ATCAGCGACT ACTACCGCGA GCGCTACGGC CGCGGCGTCG AGGTGGCCTG TTCGCTCATC
ATCATGCTGA GCTACCTGGG CTGGGTGTCG GCGCAGGTCA CGGCGCTCGG GCTGGTGTTC
AACGTGCTCT CGGCCGGCGC CATCCCCATC CCGGCGGGCA TGGTGATCGG CGTGGTGTCG
ATCCTCGCCT ACACGCTGTT CGGCGGCATG TGGTCGGTGG CCGTGACCGA TTTCATCCAG
ATGATCATCC TCGTGGCGGG GCTGGCCTGC ATTGCGGTGT TCGCCGGCAA CATGGCCGGC
GGCGCCGACA AGGTGGTGGC CTTCGCGGTC AGCAAGGACC TCTTCAGGTT CTGGCCCGAG
CCCAGCTGGC ACGACATGGT GTTCTTCTTT GCCGCGGCCA TCACGATGAT GCTCGGCTCC
ATTCCGCAGC AGGACGTGTT CCAGCGCGTG ATGTCGGCCA ACAGCGTCAA GTCCGCCACC
CGCGGCCCGG TGATCGGCGG CGTGGCGTAC ATCCTGTTCG CCTTCGTGCC GATGTTCCTG
GTGGCCAGCG CGCTGCTGAT CATGCCGGAG CAGACCGCCG CACTGCTGAA GGAAGATCCG
CAGAAGGTGC TGCCCACGCT GGTGCTCGAG AAGATGCCCT TCGCGATGCA GGTGCTGTTC
TTTGGTGCGC TGCTGTCGGC CATCAAGTCG ACCGCCTCGG CGACGCTGCT GGCACCGAGC
GTCACGTTCA CCGAGAACAT CTGGCGCCAG TTCCGTCCCG CCGGCACCGA CCGCCAGAAC
CTCATGACCA TGCGCATCAC GGTGCTGGTC TTCAGCGCAG CCGTGCTGGC CTACGCCGTC
CGCATGCAGG GCACCCCCAT CTACGAACTG GTGTCGGGCG CCTACCAGGT GCCGCTGGTC
GGCGCCTTCG TGCCGCTGGT GTGCGGGCTC TACTGGCGCC GCGCCACCAC GCAGGGCGCC
CTTGCTTCCA TTGTGCTGGG CATCGGCACC TGGCTGCTGT TCCTGGCCAT GCCCTGGGGC
AGCGCATTCC CGGCCCAGCT GGCCGGCGTG CTGGCCTCCT TTGCCGGCCT GGTGGCCGGA
TCGCTGGCGC CGCAGTGGGT GGCCAACACC CGCACGGCGC ACCGGATGCT GGCTGTCTAG
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| Protein sequence | MLLTLVVVYL LVTIAIGLYA AKRVKNTTDF AIAGRHLPLY MIVTTTFATW FGSETVLGIP
AKFIEGGLNG VIEDPFGAGT CLILVGLFFA GKLYRMTLLT ISDYYRERYG RGVEVACSLI
IMLSYLGWVS AQVTALGLVF NVLSAGAIPI PAGMVIGVVS ILAYTLFGGM WSVAVTDFIQ
MIILVAGLAC IAVFAGNMAG GADKVVAFAV SKDLFRFWPE PSWHDMVFFF AAAITMMLGS
IPQQDVFQRV MSANSVKSAT RGPVIGGVAY ILFAFVPMFL VASALLIMPE QTAALLKEDP
QKVLPTLVLE KMPFAMQVLF FGALLSAIKS TASATLLAPS VTFTENIWRQ FRPAGTDRQN
LMTMRITVLV FSAAVLAYAV RMQGTPIYEL VSGAYQVPLV GAFVPLVCGL YWRRATTQGA
LASIVLGIGT WLLFLAMPWG SAFPAQLAGV LASFAGLVAG SLAPQWVANT RTAHRMLAV
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