| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4117 |
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| Symbol | |
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| ID | 7974439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4356859 |
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| End bp | 4357740 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644794703 |
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| Product | protein of unknown function DUF6 transmembrane |
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| Protein accession | YP_002945996 |
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| Protein GI | 239817086 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2510] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCGCTTT CCGCCTTCGC GCTGATCCTG CTCGCCGGGA TCGTCCATGC CAGCTGGAAC
ATCGCCGCCA AGAAGGCGAA CGGCGATGCG CGCTTCGCAT TCCAGAGCGG CGTGTTCATG
GCCATCGTGT GGGCACCCGT GGGCATTGCG CTGGGCTGGC GCGTGGTGCC GGGCTGGGGT
TTGCGGGAGT GGGGCTTCGT CGCGCTGAGC GGCGTGCTGC ACGTCTTCTA CTACGTCATC
CTGCTGCGCG GCTACCGCAA GTCCGATCTC ACGGTGGTCT ATCCGCTGGC GCGCGGCTCG
GGCCCGCTCT TGTCGTCGCT GGTGGCCATC CTGTTCCTGG GCGAGCGCAT CAGCCTGGTG
GGTGTGGCGG GCATCGCGGG CGTGGTGCTC GGCGTGTTCC TGGTGGCGGG CGGCCCGGGC
CTCTGGCGCA AGACGCATGA CCCTGCCCAG CGCGCGCGGG TGCACAAGGG CATCCGCTAC
GGCGTGCTGA CCGGCGCCTT CATTGCGGCC TATACGGTGG CTGACAGCTA TGCCGTGAAG
TTCCTGGCGA TGTCGCCGAT CCTGCTCGAC TACTTCAGCA ATTTCGTGCG CGTGGGCCTG
CTGCTGCCCG CGGCGCTGCA CGACCGCGCC ACTACGGCGC GGATGTGGCG CGCGCAGTGG
AAGTACGCGC TGCTGGTGGC GGCGATCAGC CCGGTCTCCT ACGTGCTGGT GCTCTATGCG
GTGCAGCAGG CGCCCATTTC ACATGTTGCG CCGGCACGCG AGGTCTCGAT GCTGTTCGCC
GCGCTGATCG GCGGCCATCT GCTGCGCGAG GGCGACCGCC TGCTGCGGCT GCTGGGGGCC
GGCTTCATAG CGGCCGGCGT GGTGGCGCTC GCGCTGGGCT GA
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| Protein sequence | MPLSAFALIL LAGIVHASWN IAAKKANGDA RFAFQSGVFM AIVWAPVGIA LGWRVVPGWG
LREWGFVALS GVLHVFYYVI LLRGYRKSDL TVVYPLARGS GPLLSSLVAI LFLGERISLV
GVAGIAGVVL GVFLVAGGPG LWRKTHDPAQ RARVHKGIRY GVLTGAFIAA YTVADSYAVK
FLAMSPILLD YFSNFVRVGL LLPAALHDRA TTARMWRAQW KYALLVAAIS PVSYVLVLYA
VQQAPISHVA PAREVSMLFA ALIGGHLLRE GDRLLRLLGA GFIAAGVVAL ALG
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