Gene Vapar_4099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_4099 
SymbolgpsA 
ID7974421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp4342778 
End bp4343791 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content73% 
IMG OID644794685 
ProductNAD(P)H-dependent glycerol-3-phosphate dehydrogenase 
Protein accessionYP_002945978 
Protein GI239817068 
COG category[C] Energy production and conversion 
COG ID[COG0240] Glycerol-3-phosphate dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.385192 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATCT GCGTTCATGG CGCCGGTGCC TGGGGCACGG CGCTGGCTGT CAATGCGGCG 
GGCCGCCACG AGGTCACGCT CTGGGCGCGC GATGCGGCCC AGGCCGAGGC CATTGCCAAG
GCGCGCGAAA ACGTCCGCTA CCTGCCCGGC CTGGCACTGC CGCCCGCACT CACGGTGCGC
GCCGGCGACC TGCACCAAGC CCGGGCGGGC GCCGAACTGG TCGTGGTGGC CACGCCCATG
GCCGCGCTGC GGCAGCAGCT CATGGCCTTG CGCGGCACGA CCGCGCCGGT CGCGTGGCTG
TGCAAGGGCG TCGAACCCGC GCTCGATGCT TCGTCTCCCG CCTCCTACGG CCTGCTGGCC
CACGAAATCT GGGGGCAGGT CGCGCCTGAA CTGATGGCCG GCGTGCTCAG CGGCCCGAGC
TTTGCGCAGG AAGTCGCCGA AGGCCGCCCG ACGGCGCTGG TGGCCGCAAG CCCCCATGCC
GCGGTGCGCG ACGCGCTGGT CGAGGCCTTC CACGGCCCGG CCCTGCGCGT CTATGCCAAT
GACGACATCG TGGGCGTGGA GGTCGGCGGC GCCGTCAAGA ACGTGCTGGC CATTGCCACG
GGCCTCTGCG ACGGCCTGGC GCTGGGGCTC AATGCGCGCG CGGCGCTCAT CACGCGGGGC
CTGGCCGAAA TGACGCGCTT CGGGCTGGCG CTCGGCGCGC GCGCCGAAAC CTTCATGGGC
CTTTCCGGCC TGGGCGACCT GGTGCTCACG GCCACCGGCG ACCTTTCTCG CAACCGCAAG
GTGGGCCTGC TGCTGGCCCA GGGCCACACG CTGGCGCAGG CCGTCGCTTC GCTGGGCCAT
GTCGCCGAAG GCGTCTATTG CGCACGCACC GTGGTGCAGC GTGCGCGCGG CCTGGGCGTG
GAAATGCCCA TCGCCGAAGG CGTGGTCGCG CTGCTCGACG GCCGGCTGAG CCCGCAGGAG
GCGGTGGCCT CGCTGACCGG CCGCGATCCG GTGCCCGAGT CGGTGCGGCC CTAG
 
Protein sequence
MKICVHGAGA WGTALAVNAA GRHEVTLWAR DAAQAEAIAK ARENVRYLPG LALPPALTVR 
AGDLHQARAG AELVVVATPM AALRQQLMAL RGTTAPVAWL CKGVEPALDA SSPASYGLLA
HEIWGQVAPE LMAGVLSGPS FAQEVAEGRP TALVAASPHA AVRDALVEAF HGPALRVYAN
DDIVGVEVGG AVKNVLAIAT GLCDGLALGL NARAALITRG LAEMTRFGLA LGARAETFMG
LSGLGDLVLT ATGDLSRNRK VGLLLAQGHT LAQAVASLGH VAEGVYCART VVQRARGLGV
EMPIAEGVVA LLDGRLSPQE AVASLTGRDP VPESVRP