Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4099 |
Symbol | gpsA |
ID | 7974421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 4342778 |
End bp | 4343791 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644794685 |
Product | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase |
Protein accession | YP_002945978 |
Protein GI | 239817068 |
COG category | [C] Energy production and conversion |
COG ID | [COG0240] Glycerol-3-phosphate dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.385192 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATCT GCGTTCATGG CGCCGGTGCC TGGGGCACGG CGCTGGCTGT CAATGCGGCG GGCCGCCACG AGGTCACGCT CTGGGCGCGC GATGCGGCCC AGGCCGAGGC CATTGCCAAG GCGCGCGAAA ACGTCCGCTA CCTGCCCGGC CTGGCACTGC CGCCCGCACT CACGGTGCGC GCCGGCGACC TGCACCAAGC CCGGGCGGGC GCCGAACTGG TCGTGGTGGC CACGCCCATG GCCGCGCTGC GGCAGCAGCT CATGGCCTTG CGCGGCACGA CCGCGCCGGT CGCGTGGCTG TGCAAGGGCG TCGAACCCGC GCTCGATGCT TCGTCTCCCG CCTCCTACGG CCTGCTGGCC CACGAAATCT GGGGGCAGGT CGCGCCTGAA CTGATGGCCG GCGTGCTCAG CGGCCCGAGC TTTGCGCAGG AAGTCGCCGA AGGCCGCCCG ACGGCGCTGG TGGCCGCAAG CCCCCATGCC GCGGTGCGCG ACGCGCTGGT CGAGGCCTTC CACGGCCCGG CCCTGCGCGT CTATGCCAAT GACGACATCG TGGGCGTGGA GGTCGGCGGC GCCGTCAAGA ACGTGCTGGC CATTGCCACG GGCCTCTGCG ACGGCCTGGC GCTGGGGCTC AATGCGCGCG CGGCGCTCAT CACGCGGGGC CTGGCCGAAA TGACGCGCTT CGGGCTGGCG CTCGGCGCGC GCGCCGAAAC CTTCATGGGC CTTTCCGGCC TGGGCGACCT GGTGCTCACG GCCACCGGCG ACCTTTCTCG CAACCGCAAG GTGGGCCTGC TGCTGGCCCA GGGCCACACG CTGGCGCAGG CCGTCGCTTC GCTGGGCCAT GTCGCCGAAG GCGTCTATTG CGCACGCACC GTGGTGCAGC GTGCGCGCGG CCTGGGCGTG GAAATGCCCA TCGCCGAAGG CGTGGTCGCG CTGCTCGACG GCCGGCTGAG CCCGCAGGAG GCGGTGGCCT CGCTGACCGG CCGCGATCCG GTGCCCGAGT CGGTGCGGCC CTAG
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Protein sequence | MKICVHGAGA WGTALAVNAA GRHEVTLWAR DAAQAEAIAK ARENVRYLPG LALPPALTVR AGDLHQARAG AELVVVATPM AALRQQLMAL RGTTAPVAWL CKGVEPALDA SSPASYGLLA HEIWGQVAPE LMAGVLSGPS FAQEVAEGRP TALVAASPHA AVRDALVEAF HGPALRVYAN DDIVGVEVGG AVKNVLAIAT GLCDGLALGL NARAALITRG LAEMTRFGLA LGARAETFMG LSGLGDLVLT ATGDLSRNRK VGLLLAQGHT LAQAVASLGH VAEGVYCART VVQRARGLGV EMPIAEGVVA LLDGRLSPQE AVASLTGRDP VPESVRP
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