| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4098 |
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| Symbol | |
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| ID | 7974420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4341837 |
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| End bp | 4342715 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644794684 |
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| Product | nicotinate-nucleotide pyrophosphorylase |
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| Protein accession | YP_002945977 |
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| Protein GI | 239817067 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0157] Nicotinate-nucleotide pyrophosphorylase |
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| TIGRFAM ID | [TIGR00078] nicotinate-nucleotide pyrophosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.625607 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCCTC GCTTTGATTT TTCGGCGCCG GCCGTGGCCG CGCTGGCCCA GGCCGACGCC
GCCCGCGCCC TGCAGGAAGA CGTGGCCGAC GGCGACCTGA CCGCCTCGCT GGTCGACCCC
GGCCGCCGCG CCCATGCCCG CGTGCTGGCG CGCGAGGCGG CCGTGCTCTG CGGCGCGCCC
TGGGTCGAAG CCACCGTGCG GCAGCTCGAT CCGCAGGCCC GCATCCGCTG GCTGTGCCGC
GAGGGCGAGC GCTGCGCGGC CGACCAGACC GTGCTGGAGA TCGAGGGCAC GGCGCGCGCA
CTGCTGACGG CCGAGCGCAC CGCGCTCAAC TTCCTTCAGC TGCTGAGCGG GGTCGCCACC
AAGACCGCGC TTTACGTCGA TGCAGTGCGC GGCACGCGCG CGAGCATCGT CGACACCCGC
AAGACGCTGC CGGGCCTGCG CCTTGCTCAG AAGTACGCGG TGCGCACGGG CGGCGGCGTG
AACCACCGCA TCGGCCTTTA CGACGCGGTG CTCATCAAGG AAAACCACAT TGCCGCGGCC
GGCGGCGTGG CCGCGGCGCT GCGTGCGGTG GCGCCGGCGG CGCAGCGCGC GGCCTTCGTC
GAGGTCGAGG TCGAAACCCT GGCGCAGCTG CGCGAGGCAC TCGAGGCGGG CGCGCGCATG
GTGCTGCTCG ACAACATGGA CCTGCCAACC CTGCGCGAGG CCGTCCGCAT CAACGCCGAG
GCCGGCGAGG ACCGCAAGGC CGTGCTCGAA ATTTCGGGTG GCGTGACGCT CGAGGGCCTG
CGCACGCTGG CCGACACCGG CGTGGACCGC ATCTCCGTCG GTGCGCTCAC CAAGGACGTG
AAGGCCATCG ACTTTTCGAT GCGTTTCCAG GAAGGCTGA
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| Protein sequence | MSPRFDFSAP AVAALAQADA ARALQEDVAD GDLTASLVDP GRRAHARVLA REAAVLCGAP
WVEATVRQLD PQARIRWLCR EGERCAADQT VLEIEGTARA LLTAERTALN FLQLLSGVAT
KTALYVDAVR GTRASIVDTR KTLPGLRLAQ KYAVRTGGGV NHRIGLYDAV LIKENHIAAA
GGVAAALRAV APAAQRAAFV EVEVETLAQL REALEAGARM VLLDNMDLPT LREAVRINAE
AGEDRKAVLE ISGGVTLEGL RTLADTGVDR ISVGALTKDV KAIDFSMRFQ EG
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