| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4093 |
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| Symbol | panB |
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| ID | 7974415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4337799 |
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| End bp | 4338692 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644794679 |
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| Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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| Protein accession | YP_002945972 |
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| Protein GI | 239817062 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
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| TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGAACA CCACCACCCC ACCGCCGGAA ACCACGCCAG CCTCGCCCTA CGGCACGCTG
CCGCCGGCCT CGCGGCCCGC CTCGCGCAAG CCCCTGAGCC TGCCGCGCCT GGCCGACATG
CATGCGCGCG GCGAGAAGAT CTCGATGCTC ACGGCCTACG ACGCCACCTT CGCGGCCATG
GCCGATGCGG CGGGCATCGA TTGCCTGCTG GTCGGCGATT CGCTCGGCAT GGTCTGCCAA
GGCCTGAACA GCACCGTGGG CGTGAGCCTG GACGCCATGC GCTACCACAC CGACAGCGTC
TCGCGCGGCC TGCGCCGCGT GCAGGGCACG GCCTGGCTGA TTGCCGACCT GCCCTTCGGC
AGCTACCAGG AATCGCGCGA GCAGGCCTTG CGCAGCGCCA CGGTGCTGAT GCAGGCCGGC
GCCCACATGG TCAAGCTCGA AGGCGGCGGC TGGACCACCG AGACGGTGCG CTTCCTGGTG
GAGCGCGGCA TTCCGGTGTG CGCGCACCTG GGCCTGACGC CGCAGACCGT GCATGCGCTG
GGCGGCTACC GCGTACAGGG CAAGGGCGAC GCCGGCGCGC TGCTCAAGCA GCAGGCGCAT
GCGCTGCAGG ACGCGGGCGC CACCATGGTG GTGCTCGAGA TGGTGCCGGC CGCGCTGGCC
GCCGAGCTCA CCGCCGAACT CAAGCACTGC GCCACCATCG GCATCGGCGC CGGCAAGGGC
ACCGCCGGCC AGGTGCTGGT GTTGCACGAC ATGCTGGGCA TCAACCTCGG AAAGATGCCG
AAGTTCGTGC GCAACTTCAT GGCCGATGCG CCGGGCGTGC TGCCCGCCCT CAAGGCCTAC
GTGCAGGCCG TCAAGGACGG CAGCTTCCCC GACGACCAAC TCCACGCCTG GTAA
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| Protein sequence | MSNTTTPPPE TTPASPYGTL PPASRPASRK PLSLPRLADM HARGEKISML TAYDATFAAM
ADAAGIDCLL VGDSLGMVCQ GLNSTVGVSL DAMRYHTDSV SRGLRRVQGT AWLIADLPFG
SYQESREQAL RSATVLMQAG AHMVKLEGGG WTTETVRFLV ERGIPVCAHL GLTPQTVHAL
GGYRVQGKGD AGALLKQQAH ALQDAGATMV VLEMVPAALA AELTAELKHC ATIGIGAGKG
TAGQVLVLHD MLGINLGKMP KFVRNFMADA PGVLPALKAY VQAVKDGSFP DDQLHAW
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