| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4080 |
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| Symbol | |
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| ID | 7974402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4324759 |
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| End bp | 4325397 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644794666 |
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| Product | transferase; LpxA family |
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| Protein accession | YP_002945959 |
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| Protein GI | 239817049 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1207] N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.796207 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGAATG CCATCGATCT CACCGTCTAC ATCGCCGGCT TTGCCGCCTC GCCGCTCGCG
CGCTGGGGTG GGCTGGCGCC CTGGGAAATC ACCGCGCGGG CGGCGGAAAT CGTCCGCGAA
CTGCTCGCGG CGCTGCCGGC AGGCGAATTT GCCGTCGAAG GCGAAGTGGC GATCCACCGC
AGCGCCACCG TGGAAGCCGG CGCAGTGCTG AAGGGGCCGT TGATCATTGG CGCCGGCTGC
TTCGTGGCGG CCGGCGCCTA TCTGCGCGGC GGCAACTGGG TGGGCGAGCG CTGCACCCTC
GGCCCGGGCT CGGAGCTCAA GTCGTCCTTC GTCTTCGCGG GCACGGCCCT TGCGCACTTC
AATTTCGTCG GCGATTCGGT GCTGGGCGCA GGCGTGAACC TGGAGGCCGG CAGCATCGTC
TGCAACCACC GCAACGAGCG TGCCGCCAAG CAGATCTTCG TGCGAGCCGG CGAGGGCGGC
GCATTGCAGG CCACGGGCAG CGAGAAGTTC GGCGCGCTGG CGGGCGACGG CGTGCGCATC
GGTGCCAACG CGGTGATCGC GCCCGGCGCG CTGCTGCGTC CCGGCCTCGT GATCGCCCGC
GCTTCGCTGC TCGACCAGGA GTTGCCGGAC CCCCAGTGA
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| Protein sequence | MPNAIDLTVY IAGFAASPLA RWGGLAPWEI TARAAEIVRE LLAALPAGEF AVEGEVAIHR
SATVEAGAVL KGPLIIGAGC FVAAGAYLRG GNWVGERCTL GPGSELKSSF VFAGTALAHF
NFVGDSVLGA GVNLEAGSIV CNHRNERAAK QIFVRAGEGG ALQATGSEKF GALAGDGVRI
GANAVIAPGA LLRPGLVIAR ASLLDQELPD PQ
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