| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4076 |
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| Symbol | |
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| ID | 7974398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4320885 |
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| End bp | 4322078 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644794662 |
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| Product | Patatin |
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| Protein accession | YP_002945955 |
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| Protein GI | 239817045 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAGAGA CACCCCCCGC CACCGGTCTC CTGCTCACCG GCGGCGGCGC CCGGGCCGCC
TACCAGGTCG GCGTGCTCGA GGCCATTGCC GGCATCCGGC GCGCGGCGGG CCTGGCCGGC
CGGCGCAATC CCTTCGAAGT GATCACCGGC ACCTCGGCCG GCGCCATCAA CGCGGCCGCG
CTGGCCTGCG GCGCCGACGA CTTCGACAAA GCCGTCGAGC GCATCGCGCA GGTCTGGCGC
GACTTCCACG CGGGCCAGGT CTACCGCGCC GATTCGCTGT CGGTGCTCGG CAGCGGCACG
CGCTGGCGCA TGCTGCTCGG ACTCGGGCGC TTTGCCGCCA ACTGGATGCG CATCAAGCCG
CGCTCGCTGC TGGACAACGC GCCGCTGGCC GAGCTGCTGG CGCGCATGGT GCCGCTCGAG
CGCCTGCCCC GGCTCATGCA GCAGGGCCAC CTGCAGGCGC TGGCCGTGAC CGCCTCGAGC
TACAGCTCGG GCGAGCACGT CACCTTCTTC GAGGCCGCGG TGCCGATGGA GCCCTGGGTG
CGTTCGCAGC GGCTGTCGGT GCGCGACCGC CTCAGCCACG CGCACCTGCT GGCCTCGTCG
GCCATTCCCT TCGTGTTTCC GGCCACCGCG CTGCCGATGC AGGGGCACAC CGAATATTTC
GGCGACGGCT CGATGCGCCA GTCGGCGCCC ATCGCCGCGG CCATCCACCT GGGTGCCCAG
CGCATCCTGG TGATCGGCGC GGGCCGCATG CACGAACCGC GCGACGCCGA CGCGCCCAAC
ACCTACAGCG GCTATCCCAC CATGGCGCAG ATCGCGGGCC ATGCGCTGTC GAGCATCTTT
CTCGATGCGC TGGCGGTGGA CATCGAGCGG CTGCGGCGCA TCAACCACAC GCTCGGCCTC
ATTCCCGAGG AAGCGCGCGC ATCGAGCACG CTGCGCCCGC TCGACCTGCT GGTGATCGCG
CCGTCGGAGC GCCTGGACGT GATCGCGGCG CGCCATGTCG ATGCACTGCC CGGCGCGGTG
CGCCACCTGC TGGGCGGCTC CAAGGTTGCG GCCGACGTGA AGGGCGGTGC GCTCGCGAGC
TACCTGCTGT TCGAGGCGGG CTACACGCGC GAGCTGATGG CGCTCGGGCG GGCCGACACG
CTGCGCCAGC AGGCCGAAGT GCTGCGCTTC TTCGGGTGGG ATGCGGCGGC CTGA
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| Protein sequence | MPETPPATGL LLTGGGARAA YQVGVLEAIA GIRRAAGLAG RRNPFEVITG TSAGAINAAA
LACGADDFDK AVERIAQVWR DFHAGQVYRA DSLSVLGSGT RWRMLLGLGR FAANWMRIKP
RSLLDNAPLA ELLARMVPLE RLPRLMQQGH LQALAVTASS YSSGEHVTFF EAAVPMEPWV
RSQRLSVRDR LSHAHLLASS AIPFVFPATA LPMQGHTEYF GDGSMRQSAP IAAAIHLGAQ
RILVIGAGRM HEPRDADAPN TYSGYPTMAQ IAGHALSSIF LDALAVDIER LRRINHTLGL
IPEEARASST LRPLDLLVIA PSERLDVIAA RHVDALPGAV RHLLGGSKVA ADVKGGALAS
YLLFEAGYTR ELMALGRADT LRQQAEVLRF FGWDAAA
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