| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4065 |
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| Symbol | |
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| ID | 7974387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4307664 |
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| End bp | 4309805 |
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| Gene Length | 2142 bp |
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| Protein Length | 713 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644794652 |
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| Product | 4Fe-4S ferredoxin iron-sulfur binding domain protein |
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| Protein accession | YP_002945945 |
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| Protein GI | 239817035 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1145] Ferredoxin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.929518 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACAA CGCTGATCTG CGACTGCAAC CAGACGATGC CGCTCGAGCC GAAGACGCTC
GGCGCGGCGC TGGCTGAGCC GCTGCCCCTT CATTCCACGC TGTGCCGCCG CGAGGCGCCG
GCCTTCCAGC GCGCCATCCG CTCGGGCGAC GAGGTGGTGG TGGCCTGCAC GCAGGAGCGC
CGGCTGTTCA CCGAGCTGGC CGAACAGACC GAGGGCGCAA CTTCGCCGAT CCGCTTCGTG
AACATCCGCG AAACCGGCGG CTGGAGCCGC GACGCCAAGA GCGCAAGCCC CAAGATCGCC
GCGCTGCTGG CCGTGGCCCA TCTGCCCGAG CCCGATCCGG TCTCGACCGT GAGCTACGCA
AGCCAGGGCC GGCTCCTGAT CGTCGGCCCG CTCGACGCGG CCGAGAAGGC CGCGGCGCTG
GTCGCCGATT CGCTGCAGGT CTCGATCTTT TCCACCGGCC CGGGCGCGGC CGGCGGCGCG
CAGGAACGCC GCTGGCCCGT GATGGCCGGG CGCATCGCAT CGCTCACCGG CTGGCTCGGC
GCTTTCTCGC TGAAGTGGAC GCGCGACAAC CCCATCGACC TGGACCTGTG CACGCGCTGC
AACGCGTGCC TTGGCGTCTG TCCCGAGCAG GCGATCGGGC TCGACTACCA GATCGACCTG
GCCAGGTGCA CCTCGCACCG CGACTGCGAA AAAGCCTGCA GCGTGGCCGG TGCCATCCAT
TTCGGCCGGG CACCCGAGGC GCTCGATGCC GAGTTCGACC TGGTGCTCGA CCTGGGCGCG
AACGCGCTGA TCGACTGGCA TGCGCCGCCG CAAGGCTACT TCCACCTGGC GGGCGGGCTC
GCGCATGCCG AAGGCCTGTC GACCGTGCTG CGCCTGCGCG AGCTGGTGGG CGAGTTCGAG
AAGCCGAAGT TCTTCGACTA CAAGCAGAAG CTCTGCGCCC ACAGCCGCAA CGAGGTGGTG
GGCTGCAATG CCTGCGTCGA GGTCTGCTCG GCGCACGCCA TCTCGAGCGA CAAGGAGCGC
CAGCGCATCG TCGTCAATCC GCAGCTGTGC GTGGGCTGCG GCGCCTGCAC CACCGTGTGC
CCGACCGGCG CGCTGGGCTA CACCTACCCG CGCGCGCCCG ACCAGGGCCG CAAGCTGCGC
ACGCTGCTGG CCACCTACCT TGGCGCCGGC GGCCGCGATG CCACGGTGTT GCTGCACAGC
GAAGAGGGCG GGCAGGCGCT CATCGAACAG CTCGGCCGCG CGGCCCAGCT GGGCCGCGGC
AAGCGCGACG GCCTCGCCGG CGTGCCCGCG CATGTGCTGC CGGTGGCGCT CATGCATGTC
GCGAGCACCG GCATCGACCT GTGGCTCAGC GCCATCGCCT TCGGCGCCTC GCAGGTGGCC
GTGCTCGCCA CCGGCGAGGA GGCGCCGCGG TACCTCGATG CGCTGAGAAA GCAGATGGCC
GTTGCGCAGG CGCTGCTCAC GGGCCTGGGC TACACCGGCA CGCATTTCCA CCTGCTCGAG
GCCGGCACGC CGGCCGCGCT CGATGCCGCC CTGGCCGGCC TGCGCGCCAC GCGCCAGCGC
GTGCCCGCCA CCGCGGCGCG CTTCGCCGTG GGCGCCGAGA AGCGCGGCAC GCTCGAGATG
ACGCTCGACC ACCTGATGGA ACAGGCGCCC GCGTTGTCGG CGCCGCCTGC CGATGCTGCC
GCCGCAGCGC TTGAAATTGC GCTGCCCGCC GGTTCTCCCT TTGGCGCGGT CACGGTCAAC
AAGGACAGCT GCACGCTGTG CCTGGCCTGC GTGAGCGCCT GCCCTGCGAG CGCGCTGCAG
GACAACCAGA ATGCGCCGCA GCTGCGCTTC ATCGAGAAGA ACTGCGTGCA GTGCGGGCTG
TGCGCAACCA CCTGCCCCGA GAACGCGATT GCGCTGGTGC CGCGCCTCCT GGCCGCGCCC
GAGCGCAAGC AGCCCGTGCT GCTCAACGAG GCCAAGCCCT GGGCCTGCAT CCGCTGCAGC
AAGCCCTTCG GCACGCAAAA GGCGATCGAG GCGATGCTCG GCAAGCTCGC GGGCCACGCC
ATGTTCCAGG GCGAGGCACT CGAGCGGCTC AAGATGTGCA GCGACTGCCG GGTCATCGAC
CTGTACAGCG CGCAGAACGA AATGAAGATC ACGCAGCTAT GA
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| Protein sequence | MTTTLICDCN QTMPLEPKTL GAALAEPLPL HSTLCRREAP AFQRAIRSGD EVVVACTQER
RLFTELAEQT EGATSPIRFV NIRETGGWSR DAKSASPKIA ALLAVAHLPE PDPVSTVSYA
SQGRLLIVGP LDAAEKAAAL VADSLQVSIF STGPGAAGGA QERRWPVMAG RIASLTGWLG
AFSLKWTRDN PIDLDLCTRC NACLGVCPEQ AIGLDYQIDL ARCTSHRDCE KACSVAGAIH
FGRAPEALDA EFDLVLDLGA NALIDWHAPP QGYFHLAGGL AHAEGLSTVL RLRELVGEFE
KPKFFDYKQK LCAHSRNEVV GCNACVEVCS AHAISSDKER QRIVVNPQLC VGCGACTTVC
PTGALGYTYP RAPDQGRKLR TLLATYLGAG GRDATVLLHS EEGGQALIEQ LGRAAQLGRG
KRDGLAGVPA HVLPVALMHV ASTGIDLWLS AIAFGASQVA VLATGEEAPR YLDALRKQMA
VAQALLTGLG YTGTHFHLLE AGTPAALDAA LAGLRATRQR VPATAARFAV GAEKRGTLEM
TLDHLMEQAP ALSAPPADAA AAALEIALPA GSPFGAVTVN KDSCTLCLAC VSACPASALQ
DNQNAPQLRF IEKNCVQCGL CATTCPENAI ALVPRLLAAP ERKQPVLLNE AKPWACIRCS
KPFGTQKAIE AMLGKLAGHA MFQGEALERL KMCSDCRVID LYSAQNEMKI TQL
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