| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4062 |
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| Symbol | |
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| ID | 7974384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4303702 |
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| End bp | 4306692 |
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| Gene Length | 2991 bp |
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| Protein Length | 996 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644794649 |
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| Product | molybdopterin oxidoreductase |
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| Protein accession | YP_002945942 |
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| Protein GI | 239817032 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.818132 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGTTGA CCAAGAAAAC AGCCCCCGCG AACAGTGTCT CGCGGCAAGG GGAGCGCGAG
TCGTCCTCCC CGTTCATCCA CAGCCTGCGG CGCGGCCTTT CGGGCGCGCT GCCCACCATG
GACCGGCGTG CCTTCCTGCG GCGCTCCGGG CTCGGCGTGG GCGTGGGCCT GGCCGCGGGC
CAGCTCACGC TGATGCGCAA GGCCGAGGCG GCCGGCGAAG CACGGCCCAC GGCGGTAGGC
GCCGGCAAGG TCGAGATCAA GCGCACCGTG TGCTCCCACT GCTCGGTCGG CTGCGCCTCC
GATGCGGTGG TCGAGAACGG CGTCTGGGTG CGCCAGGAGC CGGTGTTCGA TTCGCCCATC
AACCTCGGCG CGCATTGCGC CAAGGGCGCC GCGCTGCGCG AGCACGGCCA CGGCGAATAC
CGGCTGCGCT ATCCGATGAA GCTGGTCAAC GGCAAGTACG AGCGCATCAG CTGGGACACC
GCGCTCGACG AGATCACCGC CAAGCTCAAG GAACTGCGCC AGGCCAGCGG CCCCGATTCG
GTCTACTGGA TCGGCTCGTC CAAGCACAGC AACGAGCAGT CGTACCTGCT GCGCAAGTTC
GTGAGCTTCT GGGGCAGCAA CAACTGCGAC CACCAGGCGC GCATCTGCCA CTCGACCACC
GTTGCCGGCG TTGCGAACAC ATGGGGCTAC GGCGCCATGA CCAATTCGTA CAACGACATG
CGCAACGCCA AGGTGGCGAT GTACATCGGC TCCAACGCCG CGGAGGCCCA TCCGGTCAGC
ATGCTGCACA TGCTCCATGC CAAGGAGAAC GGCTGCAAGA TGATCGTGGT CGACCCGCGC
TTCACGCGTA CTGCGGCCAA GGCCGACGAG TACGTGCGCA TCCGCTCGGG CTCCGACATC
GCCTTCCTGT TCGGCATCCT GCACCACATC TTCAAGAACG GCTGGGAAGA CAAGCAGTAC
ATCAACGACC GCGTCTTCGG CATGGACAAG GTGCGCGAGG AAGTGCTGGC CAAGTGGACG
CCCGACAAGG TCGAGGAGGC CTGCGGCGTG AAGGAGGCGC AGGTGCTCAA GGTGGCGACC
TGGCTCAACG AGAACCGTCC CGGCACCGTC GTGTGGTGCA TGGGCCAGAC GCAGCACACC
ATCGGCAACG CGATCGTGCG GGCCTCGTGC ATCCTGCAGC TGGCACTCGG CAACGTGGGC
AAGTCGGGCG GCGGCACCAA CATCTTCCGC GGCCACGACA ACGTGCAGGG CGCCACCGAC
GTGGGCCCGA ACCCCGATTC GCTGCCCGGC TACTACGGCA TCGTCGAAGG CTCGTGGAAG
CACTTCGCCG CCACCTGGGG CGTCGACTAC GAATGGATCA AGGGCCGCTT CGCGTCGCCC
GCGATGATGA CCAAGCCCGG CATCACCGTG TCGCGCTGGA TCGACGGCGT GCTCGAGAAG
AACGAGCTGA TCGACCAGGA CTCGAACCTG CGCGGCGTGT TCTATTGGGG CCATGCGCCC
AACTCGCAGA CGCGCGGCCT CGAGATGAAG CGCGCCATGG ACAAGCTCGA CCTGCTGGTG
GTGGTCGACC CCTATCCCTC GGCCACCGCC GCCATGGCGG CCATGCCCGG CAACCCCGAC
GACCTCAACA AGAACCGCGC CGTCTACCTG CTGCCCGCGT GCACGCAGTT CGAGACCAGC
GGCTCCGTCA CGGCGTCGAA CCGTTCGATC CAGTGGCGCG AGAAGGTCAT CGATCCGCTG
TGGGAAAGCC GCAGCGACCA CATGATCATG CAGCAGTTCG CCGACCGCCT GGGCTTTGGC
AAGGAACTCA GCAAGAACTA CAAGATGCAG AAGGTCAAGG GCATGGACGA GCCCCTGCCC
GACGACATCC TGCGCGAGAT CAACAAGACC TGCTGGGCCG TCGGCTACAC CGGCCAGAGC
CCCGAGCGGC TGCAGGCGCA CATGCGCAAC ATGGGCGCCT TCGACGTGCG CACGCTCAAG
GCCAAGGCCG GCGTGAAGGA CAAGGCCAAC GGCTATGACC TCACGGGCGA CTACTTCGGC
CTGCCGTGGC CCTGCTACGG CACGCCCGAG TTCAAGCACC CGGGCTCGCC CAACCTGTAC
GACACCTCCA AGCATGTGAT GGAAGGCGGC GGCAACTTCC GCGCGAACTT CGGCGTGGAG
CGCGACGGCA AGAACCTGCT GGCCGAGGAC GGCTCGCATT CGCTGGGCGC CGACATCACC
ACCGGCTACC CCGAGCTCGA CCACGTGCTG CTCAAGAAGC TGGGCTGGTG GGACGAACTC
ACCGAGGCCG AGAAGCCCAA GGCCGAAGGC AAGAACTGGA AGACCGACAG CTCGGGCGGC
ATGATCCGCG TGTTCATGAA GAACCACGGC TGCCATCCTT TCGGCAATGC CAAGGCGCGT
GCAGTGGTCT GGAACTTCCC CGACGCGATC CCGCAGCACC GCGAGCCGCT GTACGGCAAC
CGGCCCGACC TCATGGCCAA GTACCCGACG CACGACGACA AGATGGCGTT CTGGCGCCTG
CCCACGCTCT ACAAGAGCGT GCAGCAGAAG AACATCGCCG ACAAGGTGGC CGAGAAGTTC
CCGTACGTGA TGACCTCGGG CCGCCTGGTC GAATACGAGG GCGGCGGCGA GGAAACCCGC
TCGAACCCCT GGCTCGCCGA GCTGCAGCAG GAGATGTTCA TCGAGATCAA CCCCAAGGTC
GCGGCCGAGA AGGGCATCCG CAACGGCGAG CGCGCCTGGG TGCACACGCC CACGGGCGCC
AAGCTCAACG TGCAGGCCCT GGTGACCGAG CGCGTGGGGC CCGACACGGT CTTCATGCCG
TTCCACTTCT CGGGCCATTG GCAGGGCGCC GACATGCTCG GCTACTACCC CGCCGGCGCA
GCCCCCGTGG TGCGCGGCGA GGCCATCAAC ACCGGCACGA CCTACGGTTA TGACAGCGTG
ACCATGATGC AAGAGACCAA GACCACTGTC TGCAACGTAG AAAAGGCATA A
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| Protein sequence | MLLTKKTAPA NSVSRQGERE SSSPFIHSLR RGLSGALPTM DRRAFLRRSG LGVGVGLAAG
QLTLMRKAEA AGEARPTAVG AGKVEIKRTV CSHCSVGCAS DAVVENGVWV RQEPVFDSPI
NLGAHCAKGA ALREHGHGEY RLRYPMKLVN GKYERISWDT ALDEITAKLK ELRQASGPDS
VYWIGSSKHS NEQSYLLRKF VSFWGSNNCD HQARICHSTT VAGVANTWGY GAMTNSYNDM
RNAKVAMYIG SNAAEAHPVS MLHMLHAKEN GCKMIVVDPR FTRTAAKADE YVRIRSGSDI
AFLFGILHHI FKNGWEDKQY INDRVFGMDK VREEVLAKWT PDKVEEACGV KEAQVLKVAT
WLNENRPGTV VWCMGQTQHT IGNAIVRASC ILQLALGNVG KSGGGTNIFR GHDNVQGATD
VGPNPDSLPG YYGIVEGSWK HFAATWGVDY EWIKGRFASP AMMTKPGITV SRWIDGVLEK
NELIDQDSNL RGVFYWGHAP NSQTRGLEMK RAMDKLDLLV VVDPYPSATA AMAAMPGNPD
DLNKNRAVYL LPACTQFETS GSVTASNRSI QWREKVIDPL WESRSDHMIM QQFADRLGFG
KELSKNYKMQ KVKGMDEPLP DDILREINKT CWAVGYTGQS PERLQAHMRN MGAFDVRTLK
AKAGVKDKAN GYDLTGDYFG LPWPCYGTPE FKHPGSPNLY DTSKHVMEGG GNFRANFGVE
RDGKNLLAED GSHSLGADIT TGYPELDHVL LKKLGWWDEL TEAEKPKAEG KNWKTDSSGG
MIRVFMKNHG CHPFGNAKAR AVVWNFPDAI PQHREPLYGN RPDLMAKYPT HDDKMAFWRL
PTLYKSVQQK NIADKVAEKF PYVMTSGRLV EYEGGGEETR SNPWLAELQQ EMFIEINPKV
AAEKGIRNGE RAWVHTPTGA KLNVQALVTE RVGPDTVFMP FHFSGHWQGA DMLGYYPAGA
APVVRGEAIN TGTTYGYDSV TMMQETKTTV CNVEKA
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