| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4051 |
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| Symbol | |
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| ID | 7974373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4293019 |
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| End bp | 4294416 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644794638 |
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| Product | histidine kinase |
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| Protein accession | YP_002945931 |
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| Protein GI | 239817021 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.510066 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGCCG CGACTGAAGC CGTCGCGGTC GCGGGGGAGC TGCATCCGCC GCGCGCGGGC
GTGGCAAGCC TGGACAACGC CACCGGCCAC AAGAACATGC AGCAGCTGAT CGAGCTGCGC
TGGTTCGCGG TGGTCGGCCA GGTCGCCACC ATCCTGGTCG TGCACTACGG CTTCGGCATC
CGGCTGCCGC TGGAGCACAT GCTGCAGGTG CTGACCTGCC TCGCGCTCTT CAATGGCGTG
AGCCTGCTGC GCTCGCGCAG CCCGCGCCGC GTGACCAACG GCGAGCTCTT TCTCGCGCTG
CTGGTCGACG TGGCCACGCT CACCGCCCAG CTCTACCTGA GCGGCGGCGC CACCAATCCC
TTCGTCTTCC TGTACCTGCT GCAGGTCATC CTGGGCGCGG TGCTGCTGAA GGCCTGGTCG
ACCTGGACCA TCGTGGCCGT CACCTGCCTG TGCTTTGCGG GGCTCGCGCT TTTCTCGCGC
CCGCTTGCGC TGCCGCTGGA CCACGACCGC GGGCTCTGGA GCCCCTACGT GCAGGGCATG
CTGGTGTGCT TTGCGCTCAA CGCGGCGCTG CTGGTGGTGT TCATCACGCG CATCAGCCGC
AACCTGCGCG CGCGCGATGC GCGGCTGGCC GACCTGCGCC AGCGCGCATC CGAAGAAGAG
CACATCGTGC GCATGGGCCT CCTGGCCTCG GGCGCCGCGC ACGAGCTGGG CACGCCGCTG
GCCACGCTGG CCGTGATCCT GGGCGACTGG CGCCGCCTGC CGCATTTCAG CTCCGACCCC
GAGCTGCTGA CCGAGGTGGC CGAGATGGAA CTGCAGATCC AGCGCTGCAA GAGCATCGTG
AGCGGCATCC TGCTGTCGGC CGGCGAGGCG CGCGGCGAAT CGTCGGAAGA AACCACCGTC
CGCACCTTCC TCGACGAGCT GGTGGAGGAA TGGCGCAGCA CGCGGCCGGT CGAGGAGTTC
GACTACGAGA ACCGCTTTGG CCAGGACCTG CCCATGGTCT CCGATTCGGC GCTCAAGCAG
ATGATCTGCA ACGTGCTCGA CAATGCCCTG GAGGCCTCGC CGCACTGGCT GCGCTTCGAA
GTGGCGCATG ACGCCGATGC GTTGACGCTC ACGGTCACCG ATGCGGGCCC GGGCTTCCTG
CCAGCCATCC TGAAGGAGTT CGGCAAGCCC TACCAGTCGA GCAAGGGCCG CCCGGGCGGC
GGGCTCGGGC TGTTCCTGGT GGTCAACGTG GCGCGCACCC TGGGCGGCCG CGTCGCGGTG
CACAACCGGC CCGAGGGCGG CGCCATCGTG GCCATCACGC TGCCGCTCGC GGCCATCGTG
CTGGAAGAAG AAGACGACGA CGACGACGAA GAACACGAAG CGGCCGACAC CCTCACCGAT
CGAAACGCAA AGCCATGA
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| Protein sequence | MPAATEAVAV AGELHPPRAG VASLDNATGH KNMQQLIELR WFAVVGQVAT ILVVHYGFGI
RLPLEHMLQV LTCLALFNGV SLLRSRSPRR VTNGELFLAL LVDVATLTAQ LYLSGGATNP
FVFLYLLQVI LGAVLLKAWS TWTIVAVTCL CFAGLALFSR PLALPLDHDR GLWSPYVQGM
LVCFALNAAL LVVFITRISR NLRARDARLA DLRQRASEEE HIVRMGLLAS GAAHELGTPL
ATLAVILGDW RRLPHFSSDP ELLTEVAEME LQIQRCKSIV SGILLSAGEA RGESSEETTV
RTFLDELVEE WRSTRPVEEF DYENRFGQDL PMVSDSALKQ MICNVLDNAL EASPHWLRFE
VAHDADALTL TVTDAGPGFL PAILKEFGKP YQSSKGRPGG GLGLFLVVNV ARTLGGRVAV
HNRPEGGAIV AITLPLAAIV LEEEDDDDDE EHEAADTLTD RNAKP
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