| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4050 |
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| Symbol | |
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| ID | 7974372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4292178 |
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| End bp | 4293035 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644794637 |
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| Product | Surfeit locus 1 family protein |
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| Protein accession | YP_002945930 |
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| Protein GI | 239817020 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3346] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.548136 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACGCCCC CGCCGCCAGA CTCCAGCACC CGCAACGGCA CACCAGCCGG CCGCCCGCGC
GGCGCGGCGG CCCGGGTGGC TCTGGCGGTC TGCGCGGCCC TGGCCTTTGC GGGCTTCTTC
GCGCTCGGCA CCTGGCAGGT CGAGCGCCGG GCCTGGAAGC TCGATCTCAT TGCCCGCGTC
GAGCAGCGCG TGCATGCCCC GGCCTCCGAA GCGCCCGGGC GCGAGCGCTG GCCGCAGGTC
AACGCGGCCG ACGACGAATA CCGCCGCGTG CGCATCGCCG GCCGCTTCCT CCACGACAAG
GAAACGCTGG TGCAGGCCAG CACCCGGCTC GGCGCCGGCT TCTGGGTGCT GACGCCGCTG
CAGGCCACAG GCGGCCGCAT CGTGCTGGTC AACCGCGGCT TCGTGCCGCC CGAGGCGCGC
GAGCGCGCCG CCCGCGCGGC CACCGAACCC CAGGGCGAAA GCACCGTGAC CGGCCTCTTG
CGCATCAGCG AACCCAACGG CGGCTTCCTG CGCAAGAACG AGCCGGCCGC CGATCGCTGG
TTCTCGCGCG ACGTGCAGGC CATTGCCGCG GCGCGCGGCC TCTCCAACGT GGCACCGTAC
TTCGTCGATG CCGAGGCTGC GCCCTCCCCG CCCGGCGCAG CGCCTGCCTG GCCGGCCGCG
GGCCTCACGG TCATCGCCTT TCCCAACAGC CACCTGGTCT ACGCGATCAC CTGGTACGGC
CTGGCGCTGA TGGTCCTTGG CGCGGCCTGG TTCGGCTGGC GCGAGGGGCG CCGGCGCGCC
GGCGAAGCCG AAGGCGGCAC AGGCGAAAAT ACGGCCCATG CCAACGCCAC CGCCCGCCCC
GATGCCCGCC GCGACTGA
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| Protein sequence | MTPPPPDSST RNGTPAGRPR GAAARVALAV CAALAFAGFF ALGTWQVERR AWKLDLIARV
EQRVHAPASE APGRERWPQV NAADDEYRRV RIAGRFLHDK ETLVQASTRL GAGFWVLTPL
QATGGRIVLV NRGFVPPEAR ERAARAATEP QGESTVTGLL RISEPNGGFL RKNEPAADRW
FSRDVQAIAA ARGLSNVAPY FVDAEAAPSP PGAAPAWPAA GLTVIAFPNS HLVYAITWYG
LALMVLGAAW FGWREGRRRA GEAEGGTGEN TAHANATARP DARRD
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