| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4049 |
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| Symbol | |
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| ID | 7974371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4291792 |
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| End bp | 4292181 |
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| Gene Length | 390 bp |
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| Protein Length | 129 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644794636 |
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| Product | cytochrome o ubiquinol oxidase subunit IV |
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| Protein accession | YP_002945929 |
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| Protein GI | 239817019 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3125] Heme/copper-type cytochrome/quinol oxidase, subunit 4 |
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| TIGRFAM ID | [TIGR02847] cytochrome o ubiquinol oxidase subunit IV |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.164785 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCACCG CCCACACCGA AACCGCAGCG CACGACGACC ATCACGACGA TGGCCCCGTC
AGCCACAGCA CCTTCAAGGG CTACATGACC GGCTTCGTGC TGGCCGTGGT CCTGACCGCG
ATTCCGTTCT GGCTCGTCAT GGGCAACGTG CTCGGCAAGC CGAGCACCAC CTCGCTCGTG
ATCCTGGGCT TTGCCGCGGT GCAGATCGTG GTCCACATGA TCTACTTCCT GCACATGGAC
GCCAAGTCCG AGAGCGGCTG GAACATGCTG GCGCTGATCT TCACGATCGT GCTCGTCGTC
ATCACGCTGG CCGGATCGCT CTGGGTCATG TACCACATGA ACGCCAACAT GATGCCCATG
TCGGTGCACG ACATGAAGAA CATGCCTTGA
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| Protein sequence | MSTAHTETAA HDDHHDDGPV SHSTFKGYMT GFVLAVVLTA IPFWLVMGNV LGKPSTTSLV
ILGFAAVQIV VHMIYFLHMD AKSESGWNML ALIFTIVLVV ITLAGSLWVM YHMNANMMPM
SVHDMKNMP
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