| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4048 |
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| Symbol | |
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| ID | 7974370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4291130 |
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| End bp | 4291795 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644794635 |
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| Product | cytochrome o ubiquinol oxidase, subunit III |
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| Protein accession | YP_002945928 |
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| Protein GI | 239817018 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 |
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| TIGRFAM ID | [TIGR02842] cytochrome o ubiquinol oxidase, subunit III |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.235206 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTGATA CCACCGCCCT CCACTCCCCC GCGGCCGGCC ACGCCCACAG CGACGCCACG
GGCAAGCCGC CCGTGTTCGA GCTGTTCCAC GTCGGCAACG ACCACCACCC GGAAAACGGC
ACGCTGCTCG GCTTCTGGCT CTATCTGATG AGCGACTGCC TGGTCTTCGC CTGCCTGTTC
GCGGTGTACG GCGTGCTGGG CCGAAGCTAC GCGGCCGGCC CTTCGGGCGC CGACCTGTTC
GACCTGCCGC TGGTGGCGGT CAACACCTCG CTGCTGCTGC TGTCGTCGAT CACCTATGGC
TTCGCAGTGC TCGAGATGCA GAGAAAGCGC ATGGGCGGCA CGCTCGCCTG GCTGGCCATC
ACGGGCCTTT TGGGCGCGGG CTTCATCGGC CTGGAGCTCT ATGAATTCGC GCACCTGATC
CACGAGGGCG CGGGCCCGCA GCGCAGCGCG TTCCTGTCGT CGTTCTTCGC GCTGGTGGGC
ACCCACGGGC TGCACGTGAC CTTCGGCATC GTGTGGCTCA TCGTGCTGAT GATCCAGCTG
CCCAAGCACG GCTTCACCGC CGCCAACCGC CGCCGCCTGA TGTGCCTGTC GATGTTCTGG
CACTTCCTGG ACGTGGTGTG GATCGGCGTC TTCACCTTTG TCTACCTGAT GGGATCGATG
GCATGA
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| Protein sequence | MSDTTALHSP AAGHAHSDAT GKPPVFELFH VGNDHHPENG TLLGFWLYLM SDCLVFACLF
AVYGVLGRSY AAGPSGADLF DLPLVAVNTS LLLLSSITYG FAVLEMQRKR MGGTLAWLAI
TGLLGAGFIG LELYEFAHLI HEGAGPQRSA FLSSFFALVG THGLHVTFGI VWLIVLMIQL
PKHGFTAANR RRLMCLSMFW HFLDVVWIGV FTFVYLMGSM A
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