| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4046 |
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| Symbol | |
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| ID | 7974368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4288100 |
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| End bp | 4289128 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644794633 |
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| Product | ubiquinol oxidase, subunit II |
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| Protein accession | YP_002945926 |
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| Protein GI | 239817016 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 |
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| TIGRFAM ID | [TIGR01433] cytochrome o ubiquinol oxidase subunit II |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.25718 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCACCC TCAAATCTCT CCGCCGATGG CCCCTGTTGC TTCCGCTTGC CTTGCTCGCA
GGCTGCAACA CGGTGCTCAT GAACCCTTCC GGGGACATCG CCAACCAGCA GGGACGCCTC
ATCGTCGTCT CCACCGTGCT GATGCTGATC ATCATCATTC CGGTGATCGC GCTGACGCTC
TTCTTTGCCT GGCGCTATCG CCAGTCGAAC AAGGAGGCCG ACTACAGCCC CGACTGGGAC
CACTCCACCC AGCTCGAGCT CGCGATCTGG GCTGCGCCAC TGCTGATCAT CATCGCGCTG
GGGGCCATCA CCTGGATCAG CACCCACACG CTCGACCCGT ACCGGCCGCT GAGCCGGCTC
GACGCCGAGC GCCCGATTCC CGCCGAGGCC AAGCCGCTGG TGGTCGAAGT GGTGGCGCTC
GACTGGAAAT GGCTCTTCAT CTACCCCGAG CAGGGCTTTG CCACGGTGAA CGAAATGGCC
GCGCCGGTCG ACCGGCCGAT CACCTTCAAG ATCACGGCCT CGTCGGTGAT GAACTCCTTC
TTCATTCCCG CGCTGGCCGG CCAGATCTAC GCCATGCCGG GCATGGAAAC CAAGCTGCAT
GCGGTCATCA ACAAGCCGGG CGAGTTCGAG GGCTTCTCGG CCAACTACAG CGGCGCGGGC
TTCTCGGGCA TGCGCTTCAA GTTCCACGGC CTGAGCAACA CCGACTTCGA CCAGTGGGTG
CAGAAGGTCA AGTCCGGCAA GGACGGCGAA CTCACGCGCG AGCAGTACAA GAAGCTCGAA
GCGCCGAGCG AGCGCGAGCC GGTGCGGCAC TACGCCGCGG TGGCGCCCGA CCTGTACGAC
GCCATCCTCA ACCTCTGCGT CGACCGCAAC AAGATGTGCA TGAAGGAAAT GATGGCCATC
GACGCGGACG GCGGACTGGG CAAGCCCGGC GCGTTCAACA TTGCCACCAG GAAGGCCTGG
CAGGCTGACA CCCTCACCAA TTCGCCCACG CGCAAGTACG TGACGGCGAT GTGCACCACC
GAAGAATGA
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| Protein sequence | MPTLKSLRRW PLLLPLALLA GCNTVLMNPS GDIANQQGRL IVVSTVLMLI IIIPVIALTL
FFAWRYRQSN KEADYSPDWD HSTQLELAIW AAPLLIIIAL GAITWISTHT LDPYRPLSRL
DAERPIPAEA KPLVVEVVAL DWKWLFIYPE QGFATVNEMA APVDRPITFK ITASSVMNSF
FIPALAGQIY AMPGMETKLH AVINKPGEFE GFSANYSGAG FSGMRFKFHG LSNTDFDQWV
QKVKSGKDGE LTREQYKKLE APSEREPVRH YAAVAPDLYD AILNLCVDRN KMCMKEMMAI
DADGGLGKPG AFNIATRKAW QADTLTNSPT RKYVTAMCTT EE
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