| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4038 |
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| Symbol | |
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| ID | 7974604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4281431 |
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| End bp | 4282258 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644794625 |
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| Product | extracellular solute-binding protein family 3 |
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| Protein accession | YP_002945918 |
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| Protein GI | 239817008 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCACA CCCTGCTTGC CGCGGCCCTC GCCGCCTCCA CCCTGCTGAC GGGCATCGCC
GCCCATGCCG ACCAGCTCGC CGACATCAAG AAGAAGGGCG AACTCGTGGT CGGCGTGCTC
GGCACCGACG AGCCCGCGAC CTTCATCGAC CCGAAGACGC GGCAGATCGT CGGCTACGAG
GTCGACCTGG TGAACGCCAT CGCGAAGAAG ATCGGCGTGA AGCCGGTGCT CAAGCAGATT
GCCGTGGCCG CGCGCATTCC CGAGCTGCAG CAGGGCCACG TCGACCTGGT GGCGGCCGGC
CTCACGCACA ACAAGGAGCG CGAGGCGCAG ATCGACTTCT CGCTGACCAC CTTCGTCACC
GGCCAGAAGG CCATCGTGAA GAAGGACAGC GGCATCACCG AGGTGCCGCA GCTTGCCGGC
AAGAAGGTGC TGACCATCCG CGGCGGCACG CAGGAGCCCA ACATCCGCAA GGCCGTGCCC
ACCGCCGAGG TCGTGACCTT CGACACCAGC CAGCAGGCCT TCCAGGCGCT GCAGCAGGGC
AAGGGCGTGG GCTACGTCGA CGACGAGGCC GCGCTGCTGC GCAGCTACGC CAAGCTCGGC
CCGCAGAAGG CCCAGTACGT GGTGCTCAAG CAGAACCTGA GCACCGAGGC GCTGGCCATC
GGCATCAAGA AGGGCGAGAG CGCACTCAAG GCCGTGGTGG ACGACACGCT GCGCGAGCTC
GAGAAGTCGG GCGAAGCGCA GAAGATCTTC GTCAAGTGGT ATGGGCCGAA TACCGCCTCG
GGCTTCCAGA CGCGCGACTT CAAGCTGGAA AGCGACAAGA TCGACTGA
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| Protein sequence | MRHTLLAAAL AASTLLTGIA AHADQLADIK KKGELVVGVL GTDEPATFID PKTRQIVGYE
VDLVNAIAKK IGVKPVLKQI AVAARIPELQ QGHVDLVAAG LTHNKEREAQ IDFSLTTFVT
GQKAIVKKDS GITEVPQLAG KKVLTIRGGT QEPNIRKAVP TAEVVTFDTS QQAFQALQQG
KGVGYVDDEA ALLRSYAKLG PQKAQYVVLK QNLSTEALAI GIKKGESALK AVVDDTLREL
EKSGEAQKIF VKWYGPNTAS GFQTRDFKLE SDKID
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