Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4036 |
Symbol | |
ID | 7974602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 4279598 |
End bp | 4280017 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644794623 |
Product | globin |
Protein accession | YP_002945916 |
Protein GI | 239817006 |
COG category | [R] General function prediction only |
COG ID | [COG2346] Truncated hemoglobins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAGATTC ACGAAAAGCC TCCCGCCGAT ACCCCCTTCG AATGGATCGG CGGCGAACCC CGGGTGCAGG CGCTGGTCGA CCGCTTCTAC GACCTGATGG AGCTCGAACC GGCCTATGCG CAGCTGCGCG CGGTGCACGG CACCAGCCTC GACAACGCGC GCCAGCGCCT CTTCTGGTTC CTGTGCGGCT GGCTCGGCGG CCCGCAGCAC TACACCGACC GCTTCGGCCA TCCGATGCTG CGCGCGCGGC ATCTGCCGCA AAGCATCGGC GGCCACAGCA TCGGCATCAA GGAGCGCGAC CAGTGGCTGG CCTGCATGGA CCAGGCCATG GGCGAGACCG GCGTGCCCGA GGGATTGCGC GCGCGCCTGC GCGATTCGTT TTTCCAGACG GCCGACTGGA TGCGCAATCG CGGCGAATAA
|
Protein sequence | MQIHEKPPAD TPFEWIGGEP RVQALVDRFY DLMELEPAYA QLRAVHGTSL DNARQRLFWF LCGWLGGPQH YTDRFGHPML RARHLPQSIG GHSIGIKERD QWLACMDQAM GETGVPEGLR ARLRDSFFQT ADWMRNRGE
|
| |