Gene Vapar_4036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_4036 
Symbol 
ID7974602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp4279598 
End bp4280017 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content68% 
IMG OID644794623 
Productglobin 
Protein accessionYP_002945916 
Protein GI239817006 
COG category[R] General function prediction only 
COG ID[COG2346] Truncated hemoglobins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGATTC ACGAAAAGCC TCCCGCCGAT ACCCCCTTCG AATGGATCGG CGGCGAACCC 
CGGGTGCAGG CGCTGGTCGA CCGCTTCTAC GACCTGATGG AGCTCGAACC GGCCTATGCG
CAGCTGCGCG CGGTGCACGG CACCAGCCTC GACAACGCGC GCCAGCGCCT CTTCTGGTTC
CTGTGCGGCT GGCTCGGCGG CCCGCAGCAC TACACCGACC GCTTCGGCCA TCCGATGCTG
CGCGCGCGGC ATCTGCCGCA AAGCATCGGC GGCCACAGCA TCGGCATCAA GGAGCGCGAC
CAGTGGCTGG CCTGCATGGA CCAGGCCATG GGCGAGACCG GCGTGCCCGA GGGATTGCGC
GCGCGCCTGC GCGATTCGTT TTTCCAGACG GCCGACTGGA TGCGCAATCG CGGCGAATAA
 
Protein sequence
MQIHEKPPAD TPFEWIGGEP RVQALVDRFY DLMELEPAYA QLRAVHGTSL DNARQRLFWF 
LCGWLGGPQH YTDRFGHPML RARHLPQSIG GHSIGIKERD QWLACMDQAM GETGVPEGLR
ARLRDSFFQT ADWMRNRGE