| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4025 |
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| Symbol | |
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| ID | 7974590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4268593 |
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| End bp | 4269924 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644794611 |
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| Product | tryptophanyl-tRNA synthetase |
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| Protein accession | YP_002945905 |
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| Protein GI | 239816995 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0180] Tryptophanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00233] tryptophanyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.52951 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTCGT CTTCCCCCGC TCCCCTGCGC GTCCTGACCG GCATCACGCC GTCGGGCACG
CCGCACCTCG GCAACTACGT CGGCTCGATC CGCCATTCGG TACGCCAGAG CGTCGCGCCG
GGCGTCGAGA GCTTCTTCTT CCTGGCCGAC TACCACGCGC TCATCAAGGT GCAGGAGCCG
GCGCTGATCC AGCGCTCCAC GCTCGAGATC GCCGCGAGCT GGCTGGCCTG CGGGCTCGAC
CCCGAACGCG TCACCTTCTA CCGCCAGTCG GACATCGTCG AGATCACCGA GCTCACCTGG
TTCCTCACCT GCGTGACCGG CAAGGGCGTG CTCAACCGCG CCCACGCCTA CAAGGCGCAG
CTCGACAAGA ACATCGCCAA GGGCGAAGAC CCGGACGCCG ACGTGACGGC CGGCCTCTTC
ATGTACCCGG TGCTGATGGG CGCCGACATC CTGATGTTCA ACGCGCACAA GGTGCCCGTG
GGGCGCGACC AGGTGCAGCA CATCGAAATG GCGCGCGACA TGGCGCAGCG CTTCAACCAC
CAGTACGGCG AGCACTTCAC GCTGCCCGAA GCCGAGATCG ACGATGCCGT CGCCACCCTG
CCCGGCCTCG ACGGCCGCAA GATGAGCAAG AGCTACGGCA ACACCATTGC CATGTTCGCG
CCGCGCGCGC AGCTGCAAAA GCAGATCGCC AGCATCGTGA CCGACTCGCG CGCGCCCGGC
GAGCCCAAGG ACACCGAAGG CTCGGCGCTG TTCCAGATCT ACCAGGCCTT TGCCAGCGCC
GAAGAAACCG AGGCGCTGCG CAAGGCGTAC GCCGACGGCA TCGGCTGGGG CGACGCCAAG
CAGATGCTGT TCGAGCGCAT CGACCTCGAG GTGGCGCCGC TGCGCGCGCG CTACGAAGCA
CTGATGAACG ACCCGGCGGA GATCGAGCGC ATCCTGCTCA TCGGCGCCGA AAAGGCCCGC
AAGCTCTCGC GCCCCTTCAT GGCCGAGCTG CGCCATGCGG TGGGGCTGCG CAACCTTGCA
TCGGGCCGCG ACAAGGGCGG TGCCCGCAAG GCGGCCAAGG TCGCCAAGCC GAGTTTCAAG
CAGTACCGCG AGCGCGATGG CCTGTTCTAT TTCAAGCTGC TCGACGCCCA CGGCGCCACC
TTGCTGCAGA GCCGCGGATT CGCCTCGCCG CAGGAAGCCG GCCGCGCCAT CGCCGCCCTG
CAGCAGCAGC GCGGCGCGGC ACTGGCCGCG CTCGCCGAGC AGCTCGAGCC GGCCGGCCCG
GAAGAATTGC GCGCCGCGAA CGAGGCGCTG GAAGCACTGG CGGAGACAAC AACCTCTACC
AACGGAAGTT GA
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| Protein sequence | MASSSPAPLR VLTGITPSGT PHLGNYVGSI RHSVRQSVAP GVESFFFLAD YHALIKVQEP
ALIQRSTLEI AASWLACGLD PERVTFYRQS DIVEITELTW FLTCVTGKGV LNRAHAYKAQ
LDKNIAKGED PDADVTAGLF MYPVLMGADI LMFNAHKVPV GRDQVQHIEM ARDMAQRFNH
QYGEHFTLPE AEIDDAVATL PGLDGRKMSK SYGNTIAMFA PRAQLQKQIA SIVTDSRAPG
EPKDTEGSAL FQIYQAFASA EETEALRKAY ADGIGWGDAK QMLFERIDLE VAPLRARYEA
LMNDPAEIER ILLIGAEKAR KLSRPFMAEL RHAVGLRNLA SGRDKGGARK AAKVAKPSFK
QYRERDGLFY FKLLDAHGAT LLQSRGFASP QEAGRAIAAL QQQRGAALAA LAEQLEPAGP
EELRAANEAL EALAETTTST NGS
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