| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4019 |
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| Symbol | |
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| ID | 7974584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4263177 |
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| End bp | 4264097 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644794605 |
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| Product | protein of unknown function DUF344 |
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| Protein accession | YP_002945899 |
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| Protein GI | 239816989 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2326] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCTGA CGAGCGCACT TCCGGACCAC GAGGAGCTGA TGCAACGCAT CGCCCGCGAC
TTGATCGACA GCTACGACGA GGAGCTCGAA CTGGAGATCG AGGACCGCAA CATCGACGGC
CTCGACCCCG CGTCGCGCAC GGACGACAAG GCGGCGCGCC AGGCCTACTT CAAGGAATTG
TTCCGGCTGC AGGGCGAACT CGTGAAGCTG CAGGACTGGG TGCAGCACAG CAGGCAGAAG
GTGGTCATTC TTTTCGAGGG CCGCGACGCG GCGGGCAAGG GCGGCGTCAT CAAGCGCATC
ACGCAGCGCC TGAACCCGCG CGTGGCCCGC GTGGCCGCGC TGCCTGCGCC CAACGACCGC
GAGCGCACGC AGTGGTACTT CCAGCGCTAC GCCGCGCACC TGCCGGCTGC CGGCGAGATG
GTGCTGTTCG ACCGCAGTTG GTACAACCGC GCCGGCGTGG AACGCGTGAT GGGCTTTTGC
AGCGACGACG AGTACGAGGA GTTCTTCCGC ACCGTGCCGG AGTTCGAGAA GATGCTGGTG
CGCTCGGGCA TCAAGCTCAT CAAGTACTGG TTCTCCATCA CCGACGACGA GCAGCACATG
CGCTTCCTGG GCCGCATCCA CGATCCGCTC AAGCAATGGA AGCTCAGCCC CATGGACCTG
GAAAGCCGCC GCCGCTGGGA GGAATACACC AAGGCGAAGG AAATCATGCT GGAGCGCACC
CACATTGCGG AAGCGCCGTG GTGGGTGGTG CAGGCGGTGG ACAAGAAGAA GGCGCGGCTG
AACTGCATCA GCCACCTGCT GGGCCAGCTG CCCTACCAGG AGGTGCCGCA TCCGCCGGTG
GAGCTGCCCG CGCGCGAGCG CCATGCCGAC TACCTGCGCC AGCCGGTGCC GGCCAGCATG
ATCGTGCCGG AAATCTACTA G
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| Protein sequence | MMLTSALPDH EELMQRIARD LIDSYDEELE LEIEDRNIDG LDPASRTDDK AARQAYFKEL
FRLQGELVKL QDWVQHSRQK VVILFEGRDA AGKGGVIKRI TQRLNPRVAR VAALPAPNDR
ERTQWYFQRY AAHLPAAGEM VLFDRSWYNR AGVERVMGFC SDDEYEEFFR TVPEFEKMLV
RSGIKLIKYW FSITDDEQHM RFLGRIHDPL KQWKLSPMDL ESRRRWEEYT KAKEIMLERT
HIAEAPWWVV QAVDKKKARL NCISHLLGQL PYQEVPHPPV ELPARERHAD YLRQPVPASM
IVPEIY
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