| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4002 |
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| Symbol | |
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| ID | 7974567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4244791 |
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| End bp | 4246062 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644794588 |
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| Product | Glycerol-1-phosphate dehydrogenase (NAD(P)(+)) |
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| Protein accession | YP_002945882 |
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| Protein GI | 239816972 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0371] Glycerol dehydrogenase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.355652 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCTCGC TGCCCGGCGT GCTGCAGCGC TGCGCGCCGG GCCGGCGCTG GATGCTGGTG
GCCGACGAGA ACACCTGGGA TGCGGTGGGC GCGTCGGCGC AGGCCCTGCT CGAATCGCAG
GGCGTGTCCT GCGCGCCGCC GCTGGTCTTT CCTGCGAAGC CTCGCCTGAA GCCGCGCGTG
GCGCGCTCGG CGGCCATCGC ACAGCAGCTT TCCGCGCAGG CGGTCACGCC GATCGCGGTG
GGCTCGGGCG TCGTCAGCGA CCTGGCCAAG CATGCGGCCT CGCTCGCCGG CCAACCCTAT
GTGTGCCTTG CAACCGCCGC CTCCATGGAT GGCTACGCGG CCTCCGGCGC CGCACTGCTC
GATGAAGATG GCTTCAAGCG CACGCTCGCA TGCCCGCCGC CGGTGGCGGT GCTGGCCGAC
CTCGACGTGC TGCGCGCCGC GCCCGCGCGC ATGACGGCCT GGGGCTACGG CGACCTGGCC
GGCAAGTCCG TGGCCGGCGC CGACTGGCTG CTGGCCGACG CGCTCGGCGT GGAGCCCATC
AATCCGCGTC CCTACGCGCT GGTGCAGGAC CATCTCGGCG ACTGGCTCGG CGCGCCGCAG
CGCCTGGCCG TGCATGAGCC GCAGGCACTG GCCGGCTTGC TGGCCGGCCT GCTGGTCAGC
GGCTTCGCCA TGCAGGCGCA TGGCAACTCG CGCCCCGCGA GCGGCAGCGA CCACCAGTTC
TCGCACCTGT GGGAAATGGA AAACCTGCAG GTCGATGGCG AGCCCGCGGC GCATGGTGCC
TGCGTGGGCG TCGGCTGCGT CGCCATGCTG GCGATGTACG AATGGCTCAT TGCGCAGCCC
GATGCCGCAA TGGCGGCTGC CGCAGCGCAG GCGCATGACG GCCAGGACGA GGCCGCGCTG
TCGCGCGAGA TCGAGGCCGC CTTCGACAAT GAGGAATTCA GGGCCGCCGC ACGCGGCGAG
ATGAATGCGA AGGCCGCACT CGGCAGCCGC CGCGCCCGCC TCGACCAGCT GGTGCGCACC
TGGCCCGCGC TGCGCGCACA GCTGAAGCGC CAGCTGATCG GCGCGCGCGA CATGCAGCAG
CGGCTGGCCA CCGTCGGCGG CGCGAGCCAT CCCGAAGAAC TCGGCATCGG CGCCGCCAGG
TTCGCCGCCG ACCACCGCCG CGCACGCCTC ATCCGGCGCC GCTACACGCT GCTCGACCTG
CTCGACGACC TGGGCTGGCT CGACCGCGCA ATCGCCGGGC AGTTCGCGCC CGGCGGTTTC
TGGACCGCCT GA
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| Protein sequence | MRSLPGVLQR CAPGRRWMLV ADENTWDAVG ASAQALLESQ GVSCAPPLVF PAKPRLKPRV
ARSAAIAQQL SAQAVTPIAV GSGVVSDLAK HAASLAGQPY VCLATAASMD GYAASGAALL
DEDGFKRTLA CPPPVAVLAD LDVLRAAPAR MTAWGYGDLA GKSVAGADWL LADALGVEPI
NPRPYALVQD HLGDWLGAPQ RLAVHEPQAL AGLLAGLLVS GFAMQAHGNS RPASGSDHQF
SHLWEMENLQ VDGEPAAHGA CVGVGCVAML AMYEWLIAQP DAAMAAAAAQ AHDGQDEAAL
SREIEAAFDN EEFRAAARGE MNAKAALGSR RARLDQLVRT WPALRAQLKR QLIGARDMQQ
RLATVGGASH PEELGIGAAR FAADHRRARL IRRRYTLLDL LDDLGWLDRA IAGQFAPGGF
WTA
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