| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3997 |
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| Symbol | |
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| ID | 7974562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4239223 |
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| End bp | 4240764 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644794583 |
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| Product | Alkaline phosphatase |
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| Protein accession | YP_002945877 |
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| Protein GI | 239816967 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3540] Phosphodiesterase/alkaline phosphatase D |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.647493 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGGTCT CGCGCCGCCG CCTGCTGCTC GGCGGAATGG CCGCCGCATC GCTGGGCCAT
CCGTTCCTCC GGCTCCACGC GCAGCAGGCC TCGCGCGGGT TTCCGTTCAC GCTGGGCGTG
GCGTCCGGCA GCCCCAGGCC AGACGGCATG GTGCTGTGGA CCCGGCTGGC GCCCGATCCG
CCGCAGGGCG GCGGCATGGG CGAGGCCCCG GTCGACGTGC AGTGGGAAGT GGCACACGAT
GAGGGCTTTG CACGCATCGC GGCAAGGGGC AGGGCGACGG CCACCGCGGC GCTCGCGCAT
TCGGTGCACG TCGAGGTGCA GGGCCTCGCG CCCGGCCGGC CGTACTGGTA CCGCTTCACG
GCCCTTGGCG CGCGAAGCCC CGTGGGCCGC ACCCGCACCG CGCCGGCCGA GGGCGATGCC
GCACCGCAGC CGCTGCGCTT CGCCTTCGCG TCATGCCAGC AGTACGAGCA GGGCTACTAC
GCGGCCTACC GCGACATGGC CACGCAGCCG CTGGACTTCG TCGTGCACCT GGGCGACTAC
ATCTACGAAA GCTCCTGGGG CTCGCGCCAT GTGCGCCATC ACCAGGGCGG CATTCCCACG
CAGCTCGGCG AGTTCCGCGA CCGCTATGCG CTCTACAAGA CCGATCCGCA CCTGCAGGCC
GCGCACGCCG CCTTCCCCTG GCTCGTGACC TGGGACGACC ACGAGGTGGC GAACGACTAC
ACCGACGACG TCTCCCCGCG CAGCATCGAT CCCGCGCAGT TCCTTGCGAT CCGCGCCGCG
GCCTACCAGG CCTGGTACGA GCACATGCCC GTGCCCGCCA GCATGCGGCC GACAGGCGCC
GCGGCCACCA TCTACGGCCG CCACCGCTTC GGCCGCATGC TCGACGTGTT CCTGCTCGAC
GGGCGGCAGT ACCGTTCGCA CCATGCCTGC CTCGCGGGCC GCAGCGCCTC GCCGCTGGCC
GACTGCGCCG ACCGGCTGGC GGCGGAGCGC AGCTTCCTCG GCGCCAGGCA GGAAGCCTGG
CTCGCGAACG AACTGGCCGC ACCGCCGGCC CGCTGGACCG TGATCGCCCA GCCCACGCTG
CTGGCCGAGG CCGACCGCAA GCGCGGCCCC GAGCACGGCT ACTGGATGGA CGGCTGGGAT
GGCTACGCCG CCTCCCGTGC GCGCCTGCTC GACGGCCTGG CCGCGAACCA GGCGCGCGGC
GGCGACGCGC TGGTCATCAG CGGCGACGTG CATGCCTTCT GGGCCGCCGA CCTGCGCCGC
GAGCCGCAGG GGCCGGCGGT GGCCACCGAA TTCGTCGGCG GCGCCATCAC CTCCGAAGGC
CCCAGCGCCG CCGGCGTGGC CAACATGCTC GCCAAGAACG AGCACCTGCG CTACGGCCGC
GGCGACAAGC GCGGCTATGC GCAGATGGCG CTCGATGCGC GCGGCTGCAC GGTCGAGTTC
CGCGCCGTGG ACGACGAGAA GGCCGAGGAC GCCGCTGTCG CGCCGATGGC GCGCTTTGCG
GTGGAGCGCG GCGCGCCCGG CGTGCATCTT GAAAGCACCT GA
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| Protein sequence | MRVSRRRLLL GGMAAASLGH PFLRLHAQQA SRGFPFTLGV ASGSPRPDGM VLWTRLAPDP
PQGGGMGEAP VDVQWEVAHD EGFARIAARG RATATAALAH SVHVEVQGLA PGRPYWYRFT
ALGARSPVGR TRTAPAEGDA APQPLRFAFA SCQQYEQGYY AAYRDMATQP LDFVVHLGDY
IYESSWGSRH VRHHQGGIPT QLGEFRDRYA LYKTDPHLQA AHAAFPWLVT WDDHEVANDY
TDDVSPRSID PAQFLAIRAA AYQAWYEHMP VPASMRPTGA AATIYGRHRF GRMLDVFLLD
GRQYRSHHAC LAGRSASPLA DCADRLAAER SFLGARQEAW LANELAAPPA RWTVIAQPTL
LAEADRKRGP EHGYWMDGWD GYAASRARLL DGLAANQARG GDALVISGDV HAFWAADLRR
EPQGPAVATE FVGGAITSEG PSAAGVANML AKNEHLRYGR GDKRGYAQMA LDARGCTVEF
RAVDDEKAED AAVAPMARFA VERGAPGVHL EST
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