Gene Vapar_3991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_3991 
Symbol 
ID7974556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand- 
Start bp4233946 
End bp4234569 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content68% 
IMG OID644794577 
Productprotein of unknown function DUF938 
Protein accessionYP_002945871 
Protein GI239816961 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.763895 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGACC TTCCCCACAG CCCCGCCGCC GACCGCAACA AGCAGCCCAT CCTCGAGGCG 
CTGGCCCGCA TCCTCGGCGA GCGCGGCAGC GCGCTCGAGA TCGCATCCGG CACAGGCCAG 
CATGCCGCAT GGTTCGCCGC GGCCATGCCC GGGTGGACCT GGCAGCCGAC CGACGCAGAC 
GCGCGCATGC TCCCCGCGAT TGCAAGCCGC GTCGCGCAGA CAGCGCTGCC CAATCTCCGT 
GCGCCGCTGC TGCTCGACGT GACGGCGCCT CGATGGCCGT CGCAAGGTGC CGCGTTCGCT 
CTCGGAGAAG AAAAGTTCGA TGCGATCTAC TGCGCCAACA TGCTGCACAT CGCGCCGTGG 
GCCGCATGCG CCGCGTTGAT GCAAGGCGCC GCGCGGCATC TGCTTGCCGA TGGATTGCTG 
ATCACCTACG GTCCCTACTT CGAAGAAGAG AGCACACCGG CGCCGAGCAA CCTGGCATTC 
GACCAAGACC TGCGCGCCCG CAATGCCCAA TGGGGCATAC GGCACCTGGA GGACGTGGTG 
GCCGAGGCGC GCCGCGCAGG GCTTGCGCTG CGCGAGCGGC ATGCGATGCC CGCGAACAAC 
CTGCTGCTGG TCTTCGGCTT CTAG
 
Protein sequence
MSDLPHSPAA DRNKQPILEA LARILGERGS ALEIASGTGQ HAAWFAAAMP GWTWQPTDAD 
ARMLPAIASR VAQTALPNLR APLLLDVTAP RWPSQGAAFA LGEEKFDAIY CANMLHIAPW 
AACAALMQGA ARHLLADGLL ITYGPYFEEE STPAPSNLAF DQDLRARNAQ WGIRHLEDVV 
AEARRAGLAL RERHAMPANN LLLVFGF