| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3971 |
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| Symbol | |
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| ID | 7974536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4214443 |
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| End bp | 4215273 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644794557 |
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| Product | Urease accessory protein UreD |
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| Protein accession | YP_002945851 |
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| Protein GI | 239816941 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0829] Urease accessory protein UreH |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.853701 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCTGGC ACGCCCATCT TCATCTCGAC TACCGGCAGG AAGCCGCCCG CAGCGTCGCG
CGCTTTCGCC ATGACGGGCC GCTGCGCATC CTGCAAAGCC TCTACCCCGA AGGCGATGCG
ATCTGCCACA ACGTGCTGGT GCATCCGCCG GGCGGGCTGG TGGGCGGCGA CACGCTGGAC
ATCGACATCG AGGCGGCCGA CGCAAGCCAT GGCCTGATCA CCACGCCGGG CGCGTCGCGC
TTCTACCGCT CCGAAGGCGA GCTTGCGCTG CAGCGCACGC GCATCCGGCT TGCCAAGGGC
GCGCGGCTCG AGTGGCTGCC GCTGGAGGCC ATCTGCTACA GCGGCTGCCG CGCGGAGAAC
CGGCTCACCA TCGAGGCCGA GCCCGGCGCC GAGATGATCG GCTGGGACGT GACGGCCCTC
GGCCTGCCGA ACGCCAACCA GCCCTTCGAG CGCGGCACCT ACCTGCAGCA CATCGAAGTG
CCGGGCGTGT GGCTGGAGCG CGGGCGCATC GACGCAGCCG ACCATCGGCT GCTGCAGAGC
CCGCTGGGCT TCGGCGGGCA TCGCTGCATC GCGTCGCTGT TCTTCGTGTC GGGCACGCCG
GCCGCGCGGG CGCGGCGCGA GGCGCTGCTT GCGCTCGCAC GCACCGCCAT CGATGCGCAC
GGGCTGCAGG AGAGCGCCGG CGCGACCAGC CCGCATGCGG AGATCGTCGT GCTGCGCGTG
CTCGCGCCGG TGGTCGAGCC CGCGATGCAG CTGCTGCGGC AGGTGTGGCA GGCCTGGCGC
GCCGAGCTGT GGCAGTTGCC GGCGAGTTCG CCGCGGATCT GGGCGACCTA G
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| Protein sequence | MSWHAHLHLD YRQEAARSVA RFRHDGPLRI LQSLYPEGDA ICHNVLVHPP GGLVGGDTLD
IDIEAADASH GLITTPGASR FYRSEGELAL QRTRIRLAKG ARLEWLPLEA ICYSGCRAEN
RLTIEAEPGA EMIGWDVTAL GLPNANQPFE RGTYLQHIEV PGVWLERGRI DAADHRLLQS
PLGFGGHRCI ASLFFVSGTP AARARREALL ALARTAIDAH GLQESAGATS PHAEIVVLRV
LAPVVEPAMQ LLRQVWQAWR AELWQLPASS PRIWAT
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