| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3968 |
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| Symbol | |
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| ID | 7974533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4211457 |
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| End bp | 4212539 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644794554 |
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| Product | Rieske (2Fe-2S) domain protein |
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| Protein accession | YP_002945848 |
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| Protein GI | 239816938 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0886212 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGTCA CCCAACAACC CGTCTTCCGC AAGTTCTGGC ATGCCGTCAT GCCGCTCACC
GAACTGGCCA ATGGCCCGAA GCCCTTCAGG CTTCTTGGCG AAGACATCGT TCTTTTCATT
GATGCCGGCG GCCAGCCTGC CGCATTGCGC GACCGCTGCT GCCATCGCAC CGCGAAGCTG
TCGAAAGGCT GGTGCGTCGA TGCCGAAGGC CAGGCCTGCG GGCAGGGCGC CATCCAATGC
GGCTACCACG GCTGGACCTA CGACCGCAGC GGGCAGGTGA TCCGCATTCC GCAGTACGAG
GCCGAGCGCA AGATTTCGCC GGAATACCGC ACCACCGCCT ACCGCTGCAC CGCGCGCTAC
GGTTACGCAT GGGTGGCGCT CGAGGAGCCC ATTGCCGACA TTCCGGCGAT TCCGGAATTC
GACGACCCGG GCTACCGCAC GATCTTCCAG TTCTATGAAG AGTGGCAGAC CAGCCCGATG
CGCGCGCTCG AGAACTCGTT CGACAACTCG CACTTCAGCT TCGTGCACCG CGCCACCTTC
GGCGTGGCCG CGAGCCCGAA GCCGAGCAAG TACGAACTGG TGGAGAACGA GTGCGGCTTC
TACGCGGAGA CCATCATCGA AGCGGCCAAC CCGGTGAAGT TCCACGCGAT CAGCGGCGTG
ACCGATGCGA TCACCACGCG CCACATGCGC AACGCCTACT TCCTGCCGTT CTCGCGCCGG
CTCGACATCG AATACCCGAG CGGCGTGCGC CACATCATCA TCAACTGCTT CACGCCCATC
GACGACGGCC GCATGCAGCT GTGCCAATGG CTGTTCCGCA ACGACACCGA GGCCGACTGC
ACGGCGCAGA TGCTGATCGA CTTCGACGAG GCGGTCACGC GCGAGGACAA GGACATCCTC
GAATCGACCG ACCCTGATGC GCTGGTCGAC ACGCGGCGGC GCGGCGTCGA ATATTCGATG
GAGTCCGATC GGCCGGGGAT GCTGATTCGC AAGCACCTGA TGCAGTTGCT TGCGAAGCAT
GGCGAGGCGG AGGTCTACCG CGGGATGAGC AGCGGGACGA TTCCGATTGC CAAGGCTGCT
TGA
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| Protein sequence | MLVTQQPVFR KFWHAVMPLT ELANGPKPFR LLGEDIVLFI DAGGQPAALR DRCCHRTAKL
SKGWCVDAEG QACGQGAIQC GYHGWTYDRS GQVIRIPQYE AERKISPEYR TTAYRCTARY
GYAWVALEEP IADIPAIPEF DDPGYRTIFQ FYEEWQTSPM RALENSFDNS HFSFVHRATF
GVAASPKPSK YELVENECGF YAETIIEAAN PVKFHAISGV TDAITTRHMR NAYFLPFSRR
LDIEYPSGVR HIIINCFTPI DDGRMQLCQW LFRNDTEADC TAQMLIDFDE AVTREDKDIL
ESTDPDALVD TRRRGVEYSM ESDRPGMLIR KHLMQLLAKH GEAEVYRGMS SGTIPIAKAA
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