| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3956 |
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| Symbol | |
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| ID | 7970385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4199466 |
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| End bp | 4200374 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644794542 |
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| Product | 2-hydroxy-3-oxopropionate reductase |
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| Protein accession | YP_002945836 |
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| Protein GI | 239816926 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
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| TIGRFAM ID | [TIGR01505] 2-hydroxy-3-oxopropionate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCAAT CGCAAAAGAT CGGATTCATC GGACTCGGCA TCATGGGCGC ACCCATGGCG
GGCCACCTGC TCGACGCGGG GCACCAGCTC TTCGTCAACA CCCAGGGCAA CACACCCGAG
CCCTTCATCT CGAAGGCCAC CATCTGCGCC TCGGCGGCCG AGGTGGCGCG CCAGGCCGAC
GTGATCTTCA TCATGGTGCC CGACACGCCC GACGTGGAAA AAGTGCTGTT CGGCGAGCCC
GGCACGCAGG GCGTGGCCGA GGGCCTGAAG GACTCGCGCG GCAAGATCGT GGTGGACTGC
AGCTCCATCG ATCCGATTGC CACCAAGGGC TTTGCCAAGC GGATCATTGC GCTGGGCTGC
GGCTACGTCG ACGCGCCGGT CTCGGGCGGC GAAGTGGGCG CCAAGGCCGC GAGCCTCACC
ATCATGTGCG GCGGCGACGA GGGCACCTTC GGCCAGGTGC GGCCGCTGCT CGAGAAGATG
GGCAAGAACG TCACGCTGGT GGGCAACGTG GGCGATGGCC AGGTCTGCAA GGTGGCCAAC
CAGATCATCG TGGCGCTCAA CATCGCGGCC GTGGGCGAGG CGCTGCTGTT CGCCTCCAAG
GCCGGCGCCG ATCCGGCCAA GGTGCGGCAG GCACTGATGG GCGGCTTCGC GAGCTCGCGC
ATCCTCGAGG TGCACGGCGA ACGCATGATC AAGCGCACCT TCGCGCCGGG CTTCCGCATC
TCGCTGCACC AGAAGGACCT GAACCTGGCG CTGCAGAGCG CACGGGCGCT GGGCGTGGCG
CTGCCGCAGA CGGCGGGCGC GGCGCAGCTC ATGAATGCCT GCGCCGCACT AGGCCATGGC
CAGCAGGACC ACTCGGCACT GGTGCGTGCG CTCGAGGCAC TCGCGCAGCA CACCGTTACG
CCAGATTGA
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| Protein sequence | MSQSQKIGFI GLGIMGAPMA GHLLDAGHQL FVNTQGNTPE PFISKATICA SAAEVARQAD
VIFIMVPDTP DVEKVLFGEP GTQGVAEGLK DSRGKIVVDC SSIDPIATKG FAKRIIALGC
GYVDAPVSGG EVGAKAASLT IMCGGDEGTF GQVRPLLEKM GKNVTLVGNV GDGQVCKVAN
QIIVALNIAA VGEALLFASK AGADPAKVRQ ALMGGFASSR ILEVHGERMI KRTFAPGFRI
SLHQKDLNLA LQSARALGVA LPQTAGAAQL MNACAALGHG QQDHSALVRA LEALAQHTVT
PD
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