| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3948 |
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| Symbol | |
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| ID | 7970377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4190408 |
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| End bp | 4191736 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644794534 |
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| Product | C4-dicarboxylate transporter DctA |
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| Protein accession | YP_002945828 |
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| Protein GI | 239816918 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTCGCT TCGCCAAATC GCTCTTCGGC CAGGTCGTCA TTGCCCTGGT GCTCGGCGTG
CTCGCCGGCC TCTTCTTGCC GGAGTTCGCC GTCAAGCTCA AGCCGCTCGG CGACGGCTTC
ATCAAGCTGA TCAAGATGAT CATCCCGGTG CTGGTGTTCT GTGTGGTGGT GCACGGCATC
GCGGGCGCGG GCGACCTCAA GCGCGTGGGG CGGGTCGGCG TGAAGGCGCT GATCTACTTC
GAGGTGCTCA CCACCGTTGC GCTGGCCCTG GGGCTGGTGC TGGCCTTCGT GTTCCAGCCC
GGCGTGGGCA TGAACGTGGA CCCGGGCAAG CTCGATGCCA CGGCCATGAG CGCCTATGCC
TCGAACGCCG ACAAGCTCAC CAGCGGCGGC ACGGTCGAGT TCCTGATGAA GCTGATCCCC
ACCACGGTGG TCGCCGCCTT TGCCACCGGC GACGTGCTGC AGGTGCTGCT GTTCGCGGTG
CTGTTCGGCT GCGCGCTGTC GCTCTTGGGC GAGCGCGGCA AGCCGGTGGC CACGGTGGTG
GACGCGCTTT CGCTGGTGCT GTTCAAGATC ATGGGCATCA TCATCAAGCT GGCGCCGCTC
GGCGTGCTGG GCGCCATTGC CTTCACGGTG GGCAAGTACG GCATCGGCTC GCTCAAGCAG
CTGGGCATGC TGGTGGCCCT TTTCTACGGC GCGGTGCTGG TCTTCGTGTT CGTGGTGCTC
GGGCTGGTCA TGCGCATGTC GGGCTTCAGC CTGTGGAAGC TGCTGCGCTA CCTGCGCGAG
GAGCTCGCCA TCGTGTTTGC CACCACCTCG TCGGACAGCG TGCTGCCGCA GATCATGGCC
AAGCTGCGGC GCATGGGCAT CCGCGACTCG ACGGTGGGCC TGGTGATTCC CACGGGCTAC
TCGTTCAACC TGGACGCCTT CTCGATCTAC ATCACGCTCG CGGCGGTGTT CATCACGCAG
GCCACCAACA CGCCGATCTC GATGGCGGAC CTGCTGACCA TCCTGGCGAT TGCGCTGGTC
ACTTCCAAGG GCGCGCACGG CGTGCCGGGC TCGGCCATCG TGGTGCTGGC CGCCACGCTG
CACGCGATTC CCGCCATTCC GGCCATCGGC CTGGTGCTGG TGCTCTCGGT CGACTGGTTC
ATGGGCATTG CGCGCGCGCT GGGCAACCTG ATCGGCAACT GCGTGGCCAC CGTGGCCATC
GCGGCCTGGG AAGGCGACAT CGACCGCGAG CGCGCCCATG CGGTGCTCGA CGGCTCCTAC
TCGCCGGACG ACGAGCCGCT GGCCGAGCCC GAGGTGCCGG CCGTCCCCCT GGGCGCCGCC
AGCCGCTGA
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| Protein sequence | MPRFAKSLFG QVVIALVLGV LAGLFLPEFA VKLKPLGDGF IKLIKMIIPV LVFCVVVHGI
AGAGDLKRVG RVGVKALIYF EVLTTVALAL GLVLAFVFQP GVGMNVDPGK LDATAMSAYA
SNADKLTSGG TVEFLMKLIP TTVVAAFATG DVLQVLLFAV LFGCALSLLG ERGKPVATVV
DALSLVLFKI MGIIIKLAPL GVLGAIAFTV GKYGIGSLKQ LGMLVALFYG AVLVFVFVVL
GLVMRMSGFS LWKLLRYLRE ELAIVFATTS SDSVLPQIMA KLRRMGIRDS TVGLVIPTGY
SFNLDAFSIY ITLAAVFITQ ATNTPISMAD LLTILAIALV TSKGAHGVPG SAIVVLAATL
HAIPAIPAIG LVLVLSVDWF MGIARALGNL IGNCVATVAI AAWEGDIDRE RAHAVLDGSY
SPDDEPLAEP EVPAVPLGAA SR
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