| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3940 |
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| Symbol | |
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| ID | 7970369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4179749 |
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| End bp | 4181005 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644794526 |
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| Product | hypothetical protein |
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| Protein accession | YP_002945820 |
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| Protein GI | 239816910 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000344769 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCCACA GATCGATCCT GAACCTCTCC GCGGCCTTCG CAGCCGTTCT TTGCATCGCG
GCAGCGCCGC AGGAATCCGC GGCCCAGGGC CTCCCTGCCG CGAGGACCGC GGGCAGCATG
GCCGAGTTCT GCAGCAAGGG GCAGGCGGAG TACCCGGGAG GCATCGCCCG CATGCACCCT
TCGTTCAAAT TCAACATCTG CTGGTGGCTC GAGGATGCCG GCATCGAAGC ACGCAGCTTC
GACGAAATCG CCGCGGCGCT GCCGGAACAC GCCGGGCCGT CGCAGGCAGC CTGGCAAGCG
ATCTTCGACA AGCCTGCCCA GGTGCACCTG GAACGGGCCC GCGCATTCGA AGAGCGGGGC
AACGGCGCGG CTGCATCGGC CGAATACAGG AAGGCCGCTT TCTACCTTCG GATGAACCGG
CTTCCCAAGC GCGTCCCCAT GGCGGACCTG CAGGCGACCG AACGGGCCCA TGCGCTCCTG
GGAAAGCCGC TGCAGCGGAT CGCATTCAAG ACCGGCGCCA AGGAATTCAT CGGCTACTTC
CGGGCACCGC CGGCACGGCC GGGCGGCAAC GAGAAGCTGC CGGTGCTGGT CATTCTTGGC
GGCCTCGACA ACATGAAGAC CGAGATGATC CGGCACAGCG ACTACTTCAT GGGCCGCGGC
TTCGCCACCA TCATTGTGGA GAACCCGGAC ACCGGGGAGA ACCAGCTCGG GTTCCGCCCG
GAGTCCCACG CGATGTTCGA CACCGTGGCG GACTACATCA AGACCCGCAG CGACCTGGAC
GCGAGCCAGG TGGCCGTGTA CGGCTGGAGC ATGGGAGGCT ACCTGGGAAC GCTCGGCGGC
CTTGGCAACG ACTTCTACAA GGCGATCGTC AATGTGGGCG GCCCCAGCGA TTCGAGCTTT
GGGCAGGCGC ATTGCAAGGT GGCTCCTGCA TGGATCGTCG CGCCCTACAC GATGTTTGCG
AACATGAATC CGCAGACCAC GCCGCGCGAA ACGATGTGCG AGTACTACGA AGCATTCCAG
CTCTCGCGCC AGCTGAAGAA GCCGACCACC GTACAGCTGC GCAAGCCCAT TCTCATGGTG
AACGGCGCGC GCGAAGACCT CGTCTCCCGG GACGAGCCCG CTTCCCTTGC GGCGCTGGGC
TTCAACGTGA CGCAGCTGGT GTTCGGGGAA GACGGCCACA CGGCGGAGTC GAACATGAGC
GAGCACTTCG AGTTCACCGC GAACTGGCTC ATGCGGCGGC TCAAGATGGA AAACTGA
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| Protein sequence | MTHRSILNLS AAFAAVLCIA AAPQESAAQG LPAARTAGSM AEFCSKGQAE YPGGIARMHP
SFKFNICWWL EDAGIEARSF DEIAAALPEH AGPSQAAWQA IFDKPAQVHL ERARAFEERG
NGAAASAEYR KAAFYLRMNR LPKRVPMADL QATERAHALL GKPLQRIAFK TGAKEFIGYF
RAPPARPGGN EKLPVLVILG GLDNMKTEMI RHSDYFMGRG FATIIVENPD TGENQLGFRP
ESHAMFDTVA DYIKTRSDLD ASQVAVYGWS MGGYLGTLGG LGNDFYKAIV NVGGPSDSSF
GQAHCKVAPA WIVAPYTMFA NMNPQTTPRE TMCEYYEAFQ LSRQLKKPTT VQLRKPILMV
NGAREDLVSR DEPASLAALG FNVTQLVFGE DGHTAESNMS EHFEFTANWL MRRLKMEN
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